Map Viewer

Vertebrates

Mammals

Primates

Scientific name	Common name	Build	Tools
Callithrix jacchus	white-tufted-ear marmoset	Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Homo sapiens	human	Annotation Release 104 Open Organism Search page	Open BLAST page for the organism Open Organism Clone Finder page Open genome resource page for the organism
		Build 36.3 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
Macaca mulatta	rhesus macaque	Build 1.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Nomascus leucogenys	northern white-cheeked gibbon	Build 1.1 Open Organism Search page	Open BLAST page for the organism
Pan troglodytes	chimpanzee	Build 3.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Pongo abelii	Sumatran orangutan	Build 1.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

Rodents

Scientific name	Common name	Build	Tools
Cavia porcellus	domestic guinea pig	Build 1.1 Open Organism Search page	Open BLAST page for the organism
Cricetulus griseus	Chinese hamster	Build 1.1 Open Organism Search page	Open BLAST page for the organism
Mus musculus	laboratory mouse	Annotation Release 103 Open Organism Search page	Open BLAST page for the organism Open Organism Clone Finder page Open genome resource page for the organism
		Build 37.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
Rattus norvegicus	rat	Build 5.1 (Annotation Release 103) Open Organism Search page	Open BLAST page for the organism Open Organism Clone Finder page Open genome resource page for the organism
		RGSC v3.4 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page

Monotremes

Scientific name	Common name	Build	Tools
Ornithorhynchus anatinus	platypus	Build 1.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism

Marsupials

Scientific name	Common name	Build	Tools
Monodelphis domestica	opossum	Build 2.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism

Other Mammals

Scientific name	Common name	Build	Tools
Ailuropoda melanoleuca	giant panda	AilMel_1.0 Open Organism Search page	Open BLAST page for the organism
Bos taurus	cattle	6.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		5.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
Bubalus bubalis	river buffalo		Open Organism Search page Open genome resource page for the organism
Canis lupus familiaris	dog	Build 3.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Build 2.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Equus caballus	horse	EquCab2.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page Open genome resource page for the organism
Felis catus	cat		Open Organism Search page Open BLAST page for the organism Open genome resource page for the organism
Oryctolagus cuniculus	rabbit	OryCun2.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Ovis aries	sheep	Annotation Release 100 Open Organism Search page	Open BLAST page for the organism Open Organism Clone Finder page Open genome resource page for the organism
Sus scrofa	pig	Sscrofa10.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page Open genome resource page for the organism
		Sscrofa9.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page

Other Vertebrates

Scientific name	Common name	Build	Tools
Anolis carolinensis	green anole	Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Danio rerio	zebrafish	Zv9 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Zv8 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Gallus gallus	chicken	Build 3.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
Meleagris gallopavo	turkey	Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Oreochromis niloticus	Nile tilapia	Orenil1.0 Open Organism Search page	Open BLAST page for the organism Open genome resource page for the organism
Taeniopygia guttata	zebra finch	Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page Open genome resource page for the organism
Xenopus (Silurana) tropicalis	western clawed frog	Build 1.1 Open Organism Search page	Open BLAST page for the organism Open genome resource page for the organism

Invertebrates

Insects Open BLAST page for the group

Scientific name	Common name	Build	Tools
Acyrthosiphon pisum	pea aphid	Build 2.1 Open Organism Search page	Open BLAST page for the organism Open genome resource page for the organism
		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Aedes aegypti	yellow fever mosquito	Aedes_aegypti_1.1 Open Organism Search page
Anopheles gambiae	African malaria mosquito	AgamP3.3 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Apis mellifera	honey bee	Amel_4.5 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Amel_4.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Bombus terrestris	buff-tailed bumblebee	Bter_1.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Drosophila melanogaster	fruit fly	Release 5.30 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Drosophila pseudoobscura		Release 2.3 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Drosophila virilis		Release 1.2 Open Organism Search page	Open BLAST page for the organism
Nasonia vitripennis	jewel wasp	Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Tribolium castaneum	red flour beetle	Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism

Nematode Open BLAST page for the group

Scientific name	Common name	Build	Tools
Caenorhabditis briggsae		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Caenorhabditis elegans	nematode	WS195 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
		WS190 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

Echinoderms Open BLAST page for the group

Scientific name	Common name	Build	Tools
Strongylocentrotus purpuratus	purple sea urchin	Build 2.1 Open Organism Search page	Open genome resource page for the organism
		Build 1.1 Open Organism Search page

Cnidaria

Scientific name	Common name	Build	Tools
Hydra magnipapillata		Build 1.1 Open Organism Search page	Open BLAST page for the organism

Other Invertebrates

Scientific name	Common name	Build	Tools
Amphimedon queenslandica		v1.0 Open Organism Search page	Open BLAST page for the organism
Ciona intestinalis	vase tunicate	Build 1.1 Open Organism Search page	Open BLAST page for the organism
Saccoglossus kowalevskii		Build 1.1 Open Organism Search page	Open BLAST page for the organism

Protozoa Open BLAST page for the group

Scientific name	Common name	Build	Tools
Babesia bovis		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Cryptosporidium hominis		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Cryptosporidium parvum		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Dictyostelium discoideum	social amoeba	Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Eimeria maxima			Open Organism Search page
Eimeria tenella			Open Organism Search page
Giardia intestinalis		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Leishmania braziliensis		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Leishmania infantum		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Leishmania major		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Paramecium tetraurelia		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Plasmodium berghei		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Plasmodium chabaudi		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Plasmodium falciparum		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Plasmodium yoelii		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Tetrahymena thermophila		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Theileria parva		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Trichomonas vaginalis		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Trypanosoma brucei		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

Plants Open Group Search page

Flowering Plants Open BLAST page for the group

Monocots Open Group Search page

Scientific name	Common name	Build	Tools
Aegilops tauschii			Open Organism Search page Open BLAST page for the organism
Aegilops umbellulata			Open Organism Search page Open BLAST page for the organism
Allium cepa	onion		Open Organism Search page Open BLAST page for the organism
Asparagus officinalis	asparagus		Open Organism Search page Open BLAST page for the organism
Avena atlantica x Avena hirtula			Open Organism Search page
Avena strigosa x Avena wiestii			Open Organism Search page
Brachypodium distachyon			Open Organism Search page Open BLAST page for the organism Go to region on a chromosome
Cenchrus americanus	pearl millet		Open Organism Search page
Cocos nucifera	coconut palm		Open Organism Search page
Elaeis guineensis	African oil palm		Open Organism Search page
Eleusine coracana	finger millet		Open Organism Search page
Eragrostis tef	tef		Open Organism Search page Open BLAST page for the organism
Festuca pratensis	meadow ryegrass		Open Organism Search page
Hordeum bulbosum			Open Organism Search page Open BLAST page for the organism
Hordeum vulgare	barley		Open Organism Search page Open BLAST page for the organism
Lolium perenne	ryegrass		Open Organism Search page Open BLAST page for the organism
Musa acuminata	dessert banana		Open Organism Search page
Oryza latifolia			Open Organism Search page
Oryza sativa	rice	RAP Build 3 Open Organism Search page	Open BLAST page for the organism
Secale cereale	rye		Open Organism Search page Open BLAST page for the organism
Setaria italica	foxtail millet		Open Organism Search page Open BLAST page for the organism
Sorghum bicolor	sorghum		Open Organism Search page Open BLAST page for the organism Go to region on a chromosome
Triticum aestivum	wheat		Open Organism Search page Open BLAST page for the organism
Triticum turgidum	durum wheat		Open Organism Search page Open BLAST page for the organism
Zea mays	maize		Open Organism Search page Open BLAST page for the organism

Eudicots Open Group Search page

Scientific name	Common name	Build	Tools
Acacia mangium			Open Organism Search page
Antirrhinum majus	snapdragon		Open Organism Search page
Antirrhinum majus x Antirrhinum molle			Open Organism Search page
Apium graveolens			Open Organism Search page
Arabidopsis lyrata	lyrate rockcress	Arabidopsis lyrata v1.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Arabidopsis thaliana	thale cress	TAIR10 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
Arachis duranensis x Arachis stenosperma			Open Organism Search page
Arachis stenosperma x Arachis cardenasii			Open Organism Search page
Beta vulgaris	beet		Open Organism Search page Open BLAST page for the organism
Betula pendula	European white birch		Open Organism Search page
Boechera stricta			Open Organism Search page
Brassica juncea	brown mustard		Open Organism Search page Open BLAST page for the organism
Brassica napus	rapeseed		Open Organism Search page Open BLAST page for the organism
Brassica nigra	black mustard		Open Organism Search page Open BLAST page for the organism
Brassica oleracea			Open Organism Search page Open BLAST page for the organism
Brassica rapa	field mustard		Open Organism Search page Open BLAST page for the organism
Camellia sinensis	black tea		Open Organism Search page
Capsicum annuum	pepper		Open Organism Search page Open BLAST page for the organism
Capsicum annuum x Capsicum chinense			Open Organism Search page
Capsicum annuum x Capsicum frutescens			Open Organism Search page
Carica papaya	papaya		Open Organism Search page
Carya illinoinensis	pecan		Open Organism Search page
Castanea dentata x Castanea mollissima			Open Organism Search page
Citrus maxima	yu		Open Organism Search page
Coffea canephora	robusta coffee		Open Organism Search page
Corylus avellana	European hazelnut		Open Organism Search page
Cucumis melo	muskmelon		Open Organism Search page
Cynara cardunculus var. scolymus	globe artichoke		Open Organism Search page
Daucus carota	carrot		Open Organism Search page
Eucalyptus globulus	blue gum		Open Organism Search page
Eucalyptus grandis			Open Organism Search page
Eucalyptus grandis x Eucalyptus urophylla			Open Organism Search page
Eucalyptus nitens			Open Organism Search page
Eucalyptus urophylla			Open Organism Search page
Fragaria vesca x Fragaria nubicola			Open Organism Search page
Glycine max	soybean	Build 1.1 Open Organism Search page	Open BLAST page for the organism
Helianthus annuus	common sunflower		Open Organism Search page
Hevea brasiliensis	siringa		Open Organism Search page
Lablab purpureus	natoba		Open Organism Search page
Lens culinaris	lentil		Open Organism Search page
Limnanthes alba	white meadowfoam		Open Organism Search page
Lotus japonicus	birdsfoot deervetch		Open Organism Search page Open BLAST page for the organism
Lupinus angustifolius	narrow-leaved blue lupine		Open Organism Search page
Manihot esculenta	cassava		Open Organism Search page Open BLAST page for the organism
Medicago sativa	alfalfa		Open Organism Search page Open BLAST page for the organism
Medicago truncatula	barrel medic		Open Organism Search page Open BLAST page for the organism
Nicotiana acuminata	acuminate tobacco		Open Organism Search page
Nicotiana tabacum	common tobacco		Open Organism Search page
Nicotiana tomentosiformis			Open Organism Search page
Phaseolus vulgaris	kidney bean		Open Organism Search page Open BLAST page for the organism
Populus trichocarpa	poplar	Build 2.3 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Prunus armeniaca	apricot		Open Organism Search page
Prunus cerasifera	cherry plum		Open Organism Search page
Prunus dulcis	sweet almond		Open Organism Search page Open BLAST page for the organism
Prunus dulcis x Prunus persica			Open Organism Search page
Prunus persica	peach		Open Organism Search page
Prunus persica x Prunus dulcis			Open Organism Search page
Pyrus communis	pear		Open Organism Search page
Pyrus pyrifolia	sha li		Open Organism Search page
Rosa chinensis	China rose		Open Organism Search page
Rosa hybrid cultivar			Open Organism Search page
Rosa lucieae	memorial rose		Open Organism Search page
Rosa multiflora	Japanese rose		Open Organism Search page
Rubus idaeus	red raspberry		Open Organism Search page
Salix viminalis	osier		Open Organism Search page
Silene vulgaris	bladder campion		Open Organism Search page
Solanum lycopersicoides	nightshade		Open Organism Search page Open BLAST page for the organism
Solanum lycopersicum	tomato		Open Organism Search page Open BLAST page for the organism
Solanum melongena	eggplant		Open Organism Search page Open BLAST page for the organism
Solanum peruvianum	Peruvian tomato		Open Organism Search page
Solanum tuberosum	potato		Open Organism Search page Open BLAST page for the organism
Theobroma cacao	cocoa		Open Organism Search page Open BLAST page for the organism
Trifolium pratense	rotklee		Open Organism Search page
Turnera subulata x Turnera krapovickasii			Open Organism Search page
Vigna angularis	adzuki bean		Open Organism Search page
Vigna radiata	mungbean		Open Organism Search page Open BLAST page for the organism
Vigna umbellata	rice-bean		Open Organism Search page
Vigna unguiculata	cowpea		Open Organism Search page
Vitis vinifera	wine grape	IGGP build 2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open Organism Clone Finder page
		IGGP build 1 Open Organism Search page	Open BLAST page for the organism Open Organism Clone Finder page

Conifers Open Group Search page

Cypress

Scientific name	Common name	Build	Tools
Cryptomeria japonica	Japanese cedar		Open Organism Search page

Firs

Scientific name	Common name	Build	Tools
Pseudotsuga menziesii	Douglas-fir		Open Organism Search page

Pines

Scientific name	Common name	Tools
Pinus elliottii	slash pine	Open Organism Search page
Pinus pinaster	maritime pine	Open Organism Search page
Pinus sylvestris	Scots pine	Open Organism Search page
Pinus taeda	loblolly pine	Open Organism Search page
Pinus thunbergii	Japanese black pine	Open Organism Search page

Spruce

Scientific name	Common name	Build	Tools
Picea abies	Norway spruce		Open Organism Search page
Picea glauca	white spruce		Open Organism Search page

Algae

Green Algae

Scientific name	Common name	Build	Tools
Chlamydomonas reinhardtii		Build 1.1 Open Organism Search page	Open BLAST page for the organism
Ostreococcus 'lucimarinus'		Build 2.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

Red Algae

Scientific name	Common name	Build	Tools
Guillardia theta		Build 1.0 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Hemiselmis andersenii		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

Moss

Scientific name	Common name	Build	Tools
Physcomitrella patens		Build 1.1 Open Organism Search page	Open BLAST page for the organism

Fungi Open Group Search page Open BLAST page for the group

Scientific name	Common name	Build	Tools
Aspergillus clavatus		Build 1.1 Open Organism Search page	Open BLAST page for the organism Open genome resource page for the organism
Aspergillus fumigatus		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Aspergillus niger		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome Open genome resource page for the organism
Candida glabrata		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Cryptococcus neoformans		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Debaryomyces hansenii		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Encephalitozoon cuniculi		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Eremothecium gossypii		Build 3.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Gibberella zeae		Build 1.2 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Kluyveromyces lactis		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Magnaporthe oryzae	rice blast fungus	Build 3.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Neurospora crassa		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Saccharomyces cerevisiae	baker's yeast	Build 3.1 Open Organism Search page	Open BLAST page for the organism Open genome resource page for the organism
		Build 2.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Scheffersomyces stipitis		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Schizosaccharomyces pombe	fission yeast	Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Ustilago maydis		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome
Yarrowia lipolytica		Build 1.1 Open Organism Search page	Open BLAST page for the organism Go to region on a chromosome

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Small Genomes

Vertebrates

Mammals

Primates

Rodents

Monotremes

Marsupials

Other Mammals

Other Vertebrates

Invertebrates

Insects Open BLAST page for the group

Nematode Open BLAST page for the group

Echinoderms Open BLAST page for the group

Cnidaria

Other Invertebrates

Protozoa Open BLAST page for the group

Plants Open Group Search page

Flowering Plants Open BLAST page for the group

Monocots Open Group Search page

Eudicots Open Group Search page

Conifers Open Group Search page

Cypress

Firs

Pines

Spruce

Algae

Green Algae

Red Algae

Moss

Fungi Open Group Search page Open BLAST page for the group

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