| wiew.cgi?COG2165 | 88 proteins | NU | COG2165 | Type II secretory pathway, pseudopilin PulG | Help |
|---|---|---|---|---|---|
| 4 from | query genome Nostoc sp. PCC 7120 (Nostocales | Nostocali) | ||||
| 1 BUDs | all0563 ( all1765 all1769 ) all1771 | ||||
231 letters (r) 0 0 1126 = ||| 1 all1769 (231) = -17 8 249 = ||| 2 all1765 (185) = -11 -37
110 = | 4 slr1929 (183) = -23 -47 104 _ 30 RSc0723 (161) COG4968 -28 -35 102 _ 11 PA4550 (168) COG4970 -16 -46 99 = | 26 sll1694 (168) = -10 -31 98 = | 5 slr1930 (186) = 16 -40 98 = ||| 30 all0563 (207) = -22 -6 97 _ 14 RSc0722 (203) COG4970 -28 1 96 _ 13 RSp1292 (181) COG4970 -30 -31 96 _ 59 NMB0018 (170) COG4969 -30 -31 95 _ 61 NMA0264 (170) COG4969 -23 -21 95 _ 14 XF0028 (187) COG4970 -31 -51 93 _ 32 NMA0424 (149) COG4968 -31 -51 93 _ 32 NMB2016 (149) COG4968 -23 -40 93 _ 30 RSc0558 (168) COG4969 -30 -81 91 _ 35 NMA0726 (129) COG4968 -22 -36 89 _ 39 RSc0557 (173) COG4969 -30 -72 87 _ 38 NMB0547 (129) COG4968 -14 -46 87 = | 40 sll1695 (170) = -12 -52 85 _ 53 VC2423 (167) COG4969 -29 -33 84 _ 13 PA4549 (169) COG4970 -31 -80 84 = 36 CAC2103 (120) = -29 20 83 _ 34 NMB0886 (222) COG4970 125 -43 83 = 40 DR0548 (314) = -29 19 81 _ 36 NMA1106 (221) COG4970 -15 -56 81 = 36 RSc3106 (156) = -30 -58 79 _ 48 PA4556 (141) COG4968 -13 -64 78 _ 47 VC0857 (147) COG4968 -26 -77 77 = 56 RSc2301 (130) = -27 -42 77 _ 56 NMA1110 (162) COG4969 -27 -42 77 _ 56 NMB0890 (162) COG4969 -23 -60 77 = 69 PA3101 (148) = -22 -64 76 = 53 RSp0468 (144) = -25 -49 76 _ 15 RSc2679 (157) COG4970 -33 -27 76 = 30 Cj1343c (171) = -31 -25 75 = 54 VC0502 (174) = -22 -62 74 _ 61 RSc2680 (146) COG4968 -26 -79 74 = 62 RSp0470 (128) = -31 -55 74 _ 68 STM0144 (145) COG4969 -31 -54 73 _ 67 ECs0112 (146) COG4969 -31 -54 73 _ 67 ZppdD (146) COG4969 -31 -54 73 _ 68 ppdD (146) COG4969 -29 -48 73 = 28 DR1232 (154) = -19 -63 73 = 70 PA0681 (149) = -31 -56 73 _ 16 RSc0717 (143) COG4968 -24 -22 72 _ 50 XF0487 (185) COG4969 332 -68 72 _ 204 MA1505 (495) COG1008 -26 -76 72 = 53 RSp0141 (129) = -30 -36 72 = 28 VC0410 (162) = -28 -20 72 = 50 VC0409 (178) = -10 -61 72 = 66 mll6827 (156) = -21 -66 71 = 63 RSp0150 (144) = -29 -57 70 = 68 YPO0813 (145) = -16 -43 69 = 73 RSp0142 (172) = -27 -102 69 _ 64 BH2827 (102) COG4537 412 35 69 _ 255 VC1521 (677) COG0642 -31 -15 69 _ 44 XF0966 (185) COG4970 -34 -120 68 _ 14 PA0659_3 (77) COG4969 -21 -53 67 _ 46 mlr6822 (157) COG4970 8 340 67 255 YDR463w (577) -28 -57 67 = 82 VC2730 (146) = -25 -52 67 _ 80 YPO3425 (154) COG4969 -11 -61 66 = 78 RSc2310 (155) = -31 -78 66 _ 45 aq_1433 (119) COG4969 -30 -14 66 _ 66 XF0539 (187) COG4969 470 -80 66 _ 255 CAC2362 (637) COG0441 -17 -42 66 = 57 RSc2302 (172) = 297 46 66 _ 255 BS_dnaX (563) COG2812 56 -91 65 _ 255 paaY (196) COG0663 -51 25 64 _ 63 CT327 (208) COG0135 -29 -54 63 = 55 PA0678 (149) = BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= all1769 (231 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value all1769 438 e-123 all1765 100 3e-21 slr1929 47 4e-05 RSc0723 45 2e-04 PA4550 44 3e-04 sll1694 43 6e-04 slr1930 42 8e-04 all0563 42 0.001 RSc0722 42 0.001 RSp1292 42 0.001 NMB0018 42 0.002 NMA0264 41 0.002 XF0028 41 0.002 NMA0424 40 0.003 NMB2016 40 0.003 RSc0558 40 0.003 NMA0726 40 0.006 RSc0557 39 0.009 NMB0547 38 0.017 sll1695 38 0.018 VC2423 37 0.026 PA4549 37 0.035 CAC2103 37 0.038 NMB0886 37 0.051 DR0548 37 0.054 NMA1106 36 0.076 RSc3106 36 0.080 PA4556 35 0.14 VC0857 35 0.20 RSc2301 34 0.23 NMA1110 34 0.23 NMB0890 34 0.23 PA3101 34 0.25 RSp0468 34 0.27 RSc2679 34 0.28 Cj1343c 34 0.31 VC0502 33 0.38 RSc2680 33 0.48 RSp0470 33 0.54 STM0144 33 0.59 ECs0112 33 0.61 ZppdD 33 0.61 ppdD 33 0.62 DR1232 33 0.68 PA0681 33 0.70 RSc0717 33 0.71 XF0487 32 0.79 MA1505 32 0.83 RSp0141 32 0.83 VC0410 32 0.90 VC0409 32 0.94 mll6827 32 0.94 RSp0150 32 1.3 YPO0813 32 1.6 RSp0142 31 1.9 BH2827 31 2.0 VC1521 31 2.0 XF0966 31 2.0 PA0659_3 31 2.9 mlr6822 30 3.0 YDR463w 30 3.3 VC2730 30 3.4 YPO3425 30 3.7 RSc2310 30 4.0 aq_1433 30 4.0 XF0539 30 4.1 CAC2362 30 4.4 RSc2302 30 4.4 BS_dnaX 30 4.9 paaY 30 6.4 CT327 29 8.1 PA0678 29 8.8
# >all1769 # Length = 231 # # Score = 438 bits (1126), Expect = e-123 # Identities = 231/231 (100%), Positives = 231/231 (100%) # # Query: 1 MKKTRLHPFNIDRKNSIIKSLCLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPG 60 # MKKTRLHPFNIDRKNSIIKSLCLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPG # Sbjct: 1 MKKTRLHPFNIDRKNSIIKSLCLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPG 60 # # Query: 61 WSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTI 120 # WSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTI # Sbjct: 61 WSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTI 120 # # Query: 121 VDTPSKKRWQVLGEDLDIRSTGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGS 180 # VDTPSKKRWQVLGEDLDIRSTGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGS # Sbjct: 121 VDTPSKKRWQVLGEDLDIRSTGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGS 180 # # Query: 181 LTGLEFDPPAPTGSTAIPHIKIVVANNNVKRCVILKTILGATMTEKDNNCN 231 # LTGLEFDPPAPTGSTAIPHIKIVVANNNVKRCVILKTILGATMTEKDNNCN # Sbjct: 181 LTGLEFDPPAPTGSTAIPHIKIVVANNNVKRCVILKTILGATMTEKDNNCN 231 # # # >all1765 # Length = 185 # # Score = 100 bits (249), Expect = 3e-21 # Identities = 71/209 (33%), Positives = 107/209 (50%), Gaps = 37/209 (17%) # # Query: 21 LCLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLAS 80 # L L + + G+ Q++ GF+L E++AV++MVGILAA+ALP W FV+ QR+NKA V + # Sbjct: 4 LSLFDNKNGLNCQNERGFTLPEILAVILMVGILAALALPYWLTFVDTQRLNKAQYEVHNA 63 # # Query: 81 IQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTIVDTPSKKRWQVLGEDLDIRS 140 # I++AQ QA ++KL + SF+ ++ I + +HP S +P+ W L D +R # Sbjct: 64 IRQAQSQASKEKLTWQASFREQNGIVQWAVHPASV-------SPTNANWNNL--DSRVRL 114 # # Query: 141 TGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGSLTGLEFDPPAPTGSTAIPHI 200 # G+ + L N V + I FDY GS+ P G + # Sbjct: 115 DGE----STLQQSNNV--------------RRIQFDYRGSVK------QPPLGRITLSS- 149 # # Query: 201 KIVVANNNVKRCVILKTILGATMTEKDNN 229 # + +KRCV + TILGA T K+ N # Sbjct: 150 ---KSRGMIKRCVYVSTILGAMRTAKERN 175 # # # >slr1929 # Length = 183 # # Score = 47.0 bits (110), Expect = 4e-05 # Identities = 27/87 (31%), Positives = 48/87 (55%) # # Query: 34 SDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKL 93 # S G++L+E+ V ++VGILAA+A P + R +V V A++QEAQR A ++ # Sbjct: 23 SSQGWTLIEIGVVTVIVGILAAMAFPSLAGIQARNQVRSRMIEVRAAVQEAQRNAIKRGA 82 # # Query: 94 KYSVSFKVESQIPKIVIHPDSEAASTI 120 # +V+ V ++ ++ P + A + # Sbjct: 83 TCTVTIDVAARSVRLPTSPPTPMAGCL 109 # # # >RSc0723 # Length = 161 # # Score = 44.7 bits (104), Expect = 2e-04 # Identities = 20/50 (40%), Positives = 35/50 (70%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQR 86 # GF+L+EL+ VV++V IL+ IA P ++ FV + R +A A++ ++Q +R # Sbjct: 14 GFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQLFER 63 # # # >PA4550 # Length = 168 # # Score = 43.9 bits (102), Expect = 3e-04 # Identities = 19/67 (28%), Positives = 40/67 (59%) # # Query: 31 YTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKR 90 # Y + +GF+L+EL+ +V+++ I+A+ A+P + R + A + + A +Q A+ +A # Sbjct: 3 YRSNSTGFTLIELLIIVVLLAIMASFAIPNFKQLTERNELQSAAEELNAMLQYARSEAVS 62 # # Query: 91 QKLKYSV 97 # Q+ S+ # Sbjct: 63 QRRAISI 69 # # # >sll1694 # Length = 168 # # Score = 42.7 bits (99), Expect = 6e-04 # Identities = 20/54 (37%), Positives = 38/54 (70%), Gaps = 1/54 (1%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQR 86 # +++ GF+L+EL+ VV+++G+LAAIALP V + R ++A + + ++ AQ+ # Sbjct: 17 RAEGGFTLIELLVVVIIIGVLAAIALPNLLGQVGKARESEAK-STIGALNRAQQ 69 # # # >slr1930 # Length = 186 # # Score = 42.4 bits (98), Expect = 8e-04 # Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 6/103 (5%) # # Query: 14 KNSIIKSLCLPNRQFGIYTQ-SDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNK 72 # KN +IK+L + ++TQ S SG++L+E+ V +VGILA++A P + # Sbjct: 4 KNELIKAL-----KLCLFTQKSTSGWTLIEIGVVTTIVGILASVAFPSLMGIKAKMDTRG 58 # # Query: 73 ANDAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSE 115 # V+ ++++AQR A + + + + ++ + PD++ # Sbjct: 59 EFSEVVQTLRQAQRNAVKMGRECRLIMDTTNTPHRLQLDPDAK 101 # # # >all0563 # Length = 207 # # Score = 42.4 bits (98), Expect = 0.001 # Identities = 19/45 (42%), Positives = 33/45 (73%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAV 77 # + + GF+L+EL+ VV+++G+LAAIALP VN+ + ++A + V # Sbjct: 49 REEEGFTLIELLVVVIIIGVLAAIALPSLLGQVNKAKQSEARNYV 93 # # # >RSc0722 # Length = 203 # # Score = 42.0 bits (97), Expect = 0.001 # Identities = 19/66 (28%), Positives = 41/66 (61%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQK 92 # +S GF+L+EL+ + ++ I+ + P +S F+ +QR+ A D+V ++I +A+ +A Q # Sbjct: 11 RSARGFTLLELMVTIAIISIMLVLVAPSFSDFLRKQRLLSAADSVASAIGQARTRALAQS 70 # # Query: 93 LKYSVS 98 # +++ # Sbjct: 71 AYVTIA 76 # # # >RSp1292 # Length = 181 # # Score = 41.6 bits (96), Expect = 0.001 # Identities = 40/184 (21%), Positives = 78/184 (41%), Gaps = 27/184 (14%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYS 96 # GF+LVE++ V+ +V IL A P + + + R ++++ +Q A+ +A ++ S # Sbjct: 9 GFTLVEMVIVISIVAILVMFAAPSFQSTIQSARTTTEVNSLVNDLQFARSEAIKRGQPVS 68 # # Query: 97 VSFKVESQIPKIVIHPDSEAASTIVDTPSKKRWQVLGEDLDIRSTGQIKLLTNLTSKNKV 156 # + S+ A+ + + W V D+ +G I T++ + + # Sbjct: 69 LCVS-------------SDGATCLGSNKWQAGWIVFN---DVNGSGAIDSSTDVVLRRRA 112 # # Query: 157 STAVNASSTYLNTPQT--ITFDYIGSLTGLEFDPPAPTGSTAIPHIKIVVANNNVKRCVI 214 # + A S T++ +P T +T++ G TGL T T + N RCV # Sbjct: 113 TFA--GSDTFVASPTTTVLTYNREGFATGL-------TNGTVTLVLHTAPVNQQATRCVA 163 # # Query: 215 LKTI 218 # + + # Sbjct: 164 INVV 167 # # # >NMB0018 # Length = 170 # # Score = 41.6 bits (96), Expect = 0.002 # Identities = 18/37 (48%), Positives = 29/37 (77%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # GF+L+EL+ V+ +VGILAA+ALP + + R +V++A # Sbjct: 7 GFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEA 43 # # # >NMA0264 # Length = 170 # # Score = 41.2 bits (95), Expect = 0.002 # Identities = 18/37 (48%), Positives = 29/37 (77%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # GF+L+EL+ V+ +VGILAA+ALP + + R +V++A # Sbjct: 7 GFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEA 43 # # # >XF0028 # Length = 187 # # Score = 41.2 bits (95), Expect = 0.002 # Identities = 19/54 (35%), Positives = 35/54 (64%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKR 90 # GFS VEL+ + ++ ILA +A P + +N +R+ + + ++AS+Q A+ +A R # Sbjct: 14 GFSTVELMVTIAILAILAGLAYPSFMNLINGERLTSSANELVASLQLARTEAIR 67 # # # >NMA0424 # Length = 149 # # Score = 40.4 bits (93), Expect = 0.003 # Identities = 17/42 (40%), Positives = 29/42 (68%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVL 78 # GF+LVELI+VV+++ +LA I P + +V + ++N A+L # Sbjct: 6 GFTLVELISVVLILSVLALIVYPSYRNYVEKAKINTVRAALL 47 # # # >NMB2016 # Length = 149 # # Score = 40.4 bits (93), Expect = 0.003 # Identities = 17/42 (40%), Positives = 29/42 (68%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVL 78 # GF+LVELI+VV+++ +LA I P + +V + ++N A+L # Sbjct: 6 GFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALL 47 # # # >RSc0558 # Length = 168 # # Score = 40.4 bits (93), Expect = 0.003 # Identities = 19/36 (52%), Positives = 27/36 (74%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNK 72 # GF+L+EL+ VV +VGILAAIA+P + + R RV + # Sbjct: 14 GFTLIELMIVVAIVGILAAIAIPAYQDYTVRARVTE 49 # # # >NMA0726 # Length = 129 # # Score = 39.7 bits (91), Expect = 0.006 # Identities = 21/74 (28%), Positives = 40/74 (53%), Gaps = 9/74 (12%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQ----- 91 # GF+L+EL+ V ++GIL I P + ++ R R+++ +L + Q +R +++ # Sbjct: 7 GFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVKSTLLMNAQTMERYYRQKGTFAT 66 # # Query: 92 ----KLKYSVSFKV 101 # KLK + FK+ # Sbjct: 67 YDKNKLKQNEYFKI 80 # # # >RSc0557 # Length = 173 # # Score = 38.9 bits (89), Expect = 0.009 # Identities = 17/34 (50%), Positives = 26/34 (76%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRV 70 # GF+L+EL+ VV ++GILAA+A+P + + R RV # Sbjct: 15 GFTLIELMIVVAIIGILAALAIPAYQDYTIRSRV 48 # # # >NMB0547 # Length = 129 # # Score = 38.1 bits (87), Expect = 0.017 # Identities = 16/55 (29%), Positives = 33/55 (59%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQ 91 # GF+L+EL+ V ++GIL I P + ++ R R+++ +L + Q +R +++ # Sbjct: 7 GFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVRTTLLHNAQTMERYYRQK 61 # # # >sll1695 # Length = 170 # # Score = 38.1 bits (87), Expect = 0.018 # Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYS 96 # GF+L+EL+ VV+++G+L A+ LP + + + R +A +L++I +AQ+ +K ++ # Sbjct: 23 GFTLLELLVVVIILGVLGAMTLPNLFSQIGKAREAEAKQ-ILSAIGQAQQSYFFEKASFA 81 # # Query: 97 VS 98 # S # Sbjct: 82 ES 83 # # # >VC2423 # Length = 167 # # Score = 37.4 bits (85), Expect = 0.026 # Identities = 15/38 (39%), Positives = 27/38 (70%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRV 70 # + GF+L+EL+ VV ++G+LAAIA+P + +V + + # Sbjct: 21 KQQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAI 58 # # # >PA4549 # Length = 169 # # Score = 37.0 bits (84), Expect = 0.035 # Identities = 18/56 (32%), Positives = 33/56 (58%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQA 88 # +S +L EL+ ++++GIL ++ALPG +A+++ R + ASIQ + A # Sbjct: 4 RSQRALTLTELLFALVLLGILGSLALPGMAAWLDGNRERSVLHELSASIQLGRTHA 59 # # # >CAC2103 # Length = 120 # # Score = 37.0 bits (84), Expect = 0.038 # Identities = 18/55 (32%), Positives = 29/55 (52%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQ 91 # GF+L+ELI + ++ IL AI +P +++ R KA D Q A R ++ # Sbjct: 6 GFTLIELIISMSIIAILGAILVPNIYSYIRRANNEKAKDMAALVFQSAMRSYMKE 60 # # # >NMB0886 # Length = 222 # # Score = 36.6 bits (83), Expect = 0.051 # Identities = 18/62 (29%), Positives = 36/62 (58%) # # Query: 32 TQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQ 91 # T+ GF+L EL+ V+++ I+A IALP S ++ +R+ + + ++ ++ +A R # Sbjct: 3 TRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRL 62 # # Query: 92 KL 93 # L # Sbjct: 63 NL 64 # # # >DR0548 # Length = 314 # # Score = 36.6 bits (83), Expect = 0.054 # Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) # # Query: 11 IDRKNSIIKSL-CLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALP 59 # I R+ I +L PN + + GF+L+EL+ V+ ++GILAA+ +P # Sbjct: 136 ISRQRGTIHTLSAAPNHRRFTMKNTTQGFTLIELLIVIAIIGILAAVLIP 185 # # # >NMA1106 # Length = 221 # # Score = 35.8 bits (81), Expect = 0.076 # Identities = 17/62 (27%), Positives = 36/62 (57%) # # Query: 32 TQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQ 91 # T+ GF+L EL+ V+++ ++A IALP S ++ +R+ + + ++ ++ +A R # Sbjct: 3 TRKQQGFTLTELLIVMVIAAVMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRL 62 # # Query: 92 KL 93 # L # Sbjct: 63 NL 64 # # # >RSc3106 # Length = 156 # # Score = 35.8 bits (81), Expect = 0.080 # Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 4/92 (4%) # # Query: 24 PNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQE 83 # P RQ ++ GF+L+E++ VV+++GILAA+ +P + + R+ A + ASI + # Sbjct: 9 PVRQRAFARRAARGFTLIEIMVVVVILGILAALVVPKIMSRPDEARIIAAKQDI-ASISQ 67 # # Query: 84 AQRQAKRQKLKYSVSFKVESQIPKIVIHPDSE 115 # A + + +Y + E + +V P +E # Sbjct: 68 ALKLYRLDNGRYPTT---EQGLAALVTKPTTE 96 # # # >PA4556 # Length = 141 # # Score = 35.0 bits (79), Expect = 0.14 # Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQ 87 # GF+L+E++ VV ++GIL IA+P + +V R N+ L S A+++ # Sbjct: 7 GFTLLEMVVVVAVIGILLGIAIPSYQNYVIRS--NRTEGQALLSDAAARQE 55 # # # >VC0857 # Length = 147 # # Score = 34.7 bits (78), Expect = 0.20 # Identities = 22/66 (33%), Positives = 35/66 (52%), Gaps = 7/66 (10%) # # Query: 17 IIKSLCLPNRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDA 76 # I K C P+ G +L+EL+ V++VG+LA+IA P ++ +V +A A # Sbjct: 4 IRKIFCKPS------VSQQQGMTLIELMIAVVIVGVLASIAYPAYTNYVKEGHRKQAM-A 56 # # Query: 77 VLASIQ 82 # +A IQ # Sbjct: 57 DMAKIQ 62 # # # >RSc2301 # Length = 130 # # Score = 34.3 bits (77), Expect = 0.23 # Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQR--VNKANDAVL 78 # GF+L+EL+ V+ ++G+L +ALP + + R R V + N AV+ # Sbjct: 11 GFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVI 54 # # # >NMA1110 # Length = 162 # # Score = 34.3 bits (77), Expect = 0.23 # Identities = 11/31 (35%), Positives = 25/31 (80%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # GF+L+E++ VV ++GI++ IA+P + +++ + # Sbjct: 10 GFTLIEMMIVVAILGIISVIAIPSYQSYIEK 40 # # # >NMB0890 # Length = 162 # # Score = 34.3 bits (77), Expect = 0.23 # Identities = 11/31 (35%), Positives = 25/31 (80%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # GF+L+E++ VV ++GI++ IA+P + +++ + # Sbjct: 10 GFTLIEMMIVVAILGIISVIAIPSYQSYIEK 40 # # # >PA3101 # Length = 148 # # Score = 34.3 bits (77), Expect = 0.25 # Identities = 14/35 (40%), Positives = 26/35 (74%) # # Query: 25 NRQFGIYTQSDSGFSLVELIAVVMMVGILAAIALP 59 # N+ + + SGF+L+E++ VV+++GILAA+ +P # Sbjct: 2 NQSRPLQRRQQSGFTLIEIMVVVVILGILAALVVP 36 # # # >RSp0468 # Length = 144 # # Score = 33.9 bits (76), Expect = 0.27 # Identities = 20/55 (36%), Positives = 32/55 (57%), Gaps = 1/55 (1%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQ 87 # Q GF+L+EL+ VV ++G+LAA P + A + + V A A L + ++A Q # Sbjct: 11 QEARGFTLLELLVVVAIIGLLAAYVGPRYFAQLGKSEVGVAK-AQLQAFEKAVDQ 64 # # # >RSc2679 # Length = 157 # # Score = 33.9 bits (76), Expect = 0.28 # Identities = 20/62 (32%), Positives = 35/62 (56%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYS 96 # G +L EL+ + ++ IL IA+P +S + QR A+ + A+I A+ +A +Q + # Sbjct: 12 GVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLARSEAVKQNTTAT 71 # # Query: 97 VS 98 # VS # Sbjct: 72 VS 73 # # # >Cj1343c # Length = 171 # # Score = 33.9 bits (76), Expect = 0.31 # Identities = 16/36 (44%), Positives = 28/36 (77%) # # Query: 38 FSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # F+++EL+ V++++GILAAIALP S+ + V+K+ # Sbjct: 5 FTILELVFVIVILGILAAIALPKMSSSKDEAEVSKS 40 # # # >VC0502 # Length = 174 # # Score = 33.5 bits (75), Expect = 0.38 # Identities = 19/52 (36%), Positives = 33/52 (62%), Gaps = 5/52 (9%) # # Query: 35 DSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKAND--AVLASIQEA 84 # + GF+L+ELI ++++G++A IA P F+N + KAN +V A ++ A # Sbjct: 4 NQGFTLIELIIAIVILGVIAVIAAP---RFINISKDAKANTMLSVAAGMESA 52 # # # >RSc2680 # Length = 146 # # Score = 33.1 bits (74), Expect = 0.48 # Identities = 18/55 (32%), Positives = 31/55 (55%), Gaps = 1/55 (1%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQ 87 # +S GF+L+EL+ V +V ILA +A P + +V R A ++ + + AQ + # Sbjct: 11 RSARGFTLIELMIVAAIVAILAVLAYPSYVQYVVRSN-RAAAESFMQEVAAAQER 64 # # # >RSp0470 # Length = 128 # # Score = 33.1 bits (74), Expect = 0.54 # Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVN--RQRVNKAN 74 # GF+L+EL+ V+ ++ +L IALP + V+ ++RV +AN # Sbjct: 11 GFTLIELMVVMAVIALLTTIALPQYFKHVDTAKERVLRAN 50 # # # >STM0144 # Length = 145 # # Score = 33.1 bits (74), Expect = 0.59 # Identities = 11/35 (31%), Positives = 24/35 (68%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # + GF+L+EL+ V+ ++ IL+AI +P + ++ + # Sbjct: 2 EKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRK 36 # # # >ECs0112 # Length = 146 # # Score = 32.7 bits (73), Expect = 0.61 # Identities = 11/31 (35%), Positives = 23/31 (73%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # GF+L+EL+ V+ ++ IL+AI +P + ++ + # Sbjct: 6 GFTLIELMVVIGIIAILSAIGIPAYQNYLRK 36 # # # >ZppdD # Length = 146 # # Score = 32.7 bits (73), Expect = 0.61 # Identities = 11/31 (35%), Positives = 23/31 (73%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # GF+L+EL+ V+ ++ IL+AI +P + ++ + # Sbjct: 6 GFTLIELMVVIGIIAILSAIGIPAYQNYLRK 36 # # # >ppdD # Length = 146 # # Score = 32.7 bits (73), Expect = 0.62 # Identities = 11/31 (35%), Positives = 23/31 (73%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNR 67 # GF+L+EL+ V+ ++ IL+AI +P + ++ + # Sbjct: 6 GFTLIELMVVIGIIAILSAIGIPAYQNYLRK 36 # # # >DR1232 # Length = 154 # # Score = 32.7 bits (73), Expect = 0.68 # Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALPGWSAF--VNRQRVNKANDAVLASIQEAQRQAKR 90 # + SG +L+EL+ V+ ++GIL + L GW+ + + +A V +++A+ QA+R # Sbjct: 4 RGQSGMTLIELLVVIAIIGIL--MGLFGWNLVRSIRAAELREAATQVAVDLRQARSQAQR 61 # # # >PA0681 # Length = 149 # # Score = 32.7 bits (73), Expect = 0.70 # Identities = 12/23 (52%), Positives = 21/23 (91%) # # Query: 37 GFSLVELIAVVMMVGILAAIALP 59 # GF+L+E++ VV+++GILAA+ +P # Sbjct: 18 GFTLIEIMVVVVILGILAAMVVP 40 # # # >RSc0717 # Length = 143 # # Score = 32.7 bits (73), Expect = 0.71 # Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) # # Query: 36 SGFSLVELIAVVMMVGILAAIALPGWS-AFVNRQRVNKANDAVLASIQEAQRQAKRQKLK 94 # +GF+ +EL+ + + G+LA A WS A++ +R+ A A L + A Q Q # Sbjct: 5 TGFTFIELLITLAIAGVLALAASQAWSGAYLRTERM--AAHAALVATMAALEQHHAQTGS 62 # # Query: 95 YSV 97 # Y++ # Sbjct: 63 YAL 65 # # # >XF0487 # Length = 185 # # Score = 32.3 bits (72), Expect = 0.79 # Identities = 12/45 (26%), Positives = 28/45 (61%) # # Query: 29 GIYTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # G + GF+++EL+ +++++ +L AI LP + ++ + +V A # Sbjct: 5 GCMMKKQQGFNVIELMILIVIIAVLTAITLPIYQYYIAKSQVTAA 49 # # # >MA1505 # Length = 495 # # Score = 32.3 bits (72), Expect = 0.83 # Identities = 11/23 (47%), Positives = 19/23 (81%) # # Query: 43 LIAVVMMVGILAAIALPGWSAFV 65 # ++AV+MMVG +A++ LPG + F+ # Sbjct: 375 MLAVLMMVGFMASLGLPGLTGFI 397 # # # >RSp0141 # Length = 129 # # Score = 32.3 bits (72), Expect = 0.83 # Identities = 14/38 (36%), Positives = 25/38 (64%) # # Query: 32 TQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQR 69 # T S F+L+EL+ V+ +V +L IA+P + + V+R + # Sbjct: 6 TNETSAFTLIELLVVLAIVAVLLTIAVPRYFSSVDRAK 43 # # # >VC0410 # Length = 162 # # Score = 32.3 bits (72), Expect = 0.90 # Identities = 28/92 (30%), Positives = 47/92 (50%), Gaps = 9/92 (9%) # # Query: 37 GFSLVELIAVVMMVGILAAIALP---GWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKL 93 # GF+L+EL+ V++++GIL+A A G S+F V +LAS++ Q +A Q+ # Sbjct: 7 GFTLIELVVVIILLGILSAYAASRFLGPSSFA----VVTTQSEILASLRLTQSRA-MQRT 61 # # Query: 94 KYSVSFKVESQIPKIVIHPDSEAASTIVDTPS 125 # Y + + S I + P + S + PS # Sbjct: 62 GYCNRWLLTSN-AAIQVSPQAMQGSCLSVFPS 92 # # # >VC0409 # Length = 178 # # Score = 32.3 bits (72), Expect = 0.94 # Identities = 19/55 (34%), Positives = 32/55 (57%), Gaps = 5/55 (9%) # # Query: 30 IYTQSDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEA 84 # + + GF+L+EL+ V++++GILA A P F+N Q A +A L ++ A # Sbjct: 2 VIMKRQGGFTLIELVVVIVILGILAVTAAP---RFLNLQ--GDAREASLEGLRGA 51 # # # >mll6827 # Length = 156 # # Score = 32.3 bits (72), Expect = 0.94 # Identities = 22/81 (27%), Positives = 39/81 (47%), Gaps = 4/81 (4%) # # Query: 35 DSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLK 94 # + GF+LVEL+ V+ ++ ++A +A P ++ R N A A + +I+ A K # Sbjct: 25 EGGFTLVELLVVLAIIALIATLAAPQVLRYLGAARTNAAK-AQIRNIESALELYYVDNAK 83 # # Query: 95 YSVSFKVESQIPKIVIHPDSE 115 # Y + E + +V P E # Sbjct: 84 YPTN---EEGLNALVAQPAGE 101 # # # >RSp0150 # Length = 144 # # Score = 32.0 bits (71), Expect = 1.3 # Identities = 14/34 (41%), Positives = 23/34 (67%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRV 70 # GF+L+EL+ VV ++G+LAA P + A + + V # Sbjct: 16 GFTLLELLVVVAIIGLLAAYVGPRYFAQIGKSEV 49 # # # >YPO0813 # Length = 145 # # Score = 31.6 bits (70), Expect = 1.6 # Identities = 13/37 (35%), Positives = 26/37 (70%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # GF+L+E++ V++++G+LA++ +P + NR KA # Sbjct: 8 GFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKA 44 # # # >RSp0142 # Length = 172 # # Score = 31.2 bits (69), Expect = 1.9 # Identities = 13/33 (39%), Positives = 22/33 (66%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQR 69 # GF+L+EL+ + ++G+LA IA+P + R R # Sbjct: 21 GFTLIELLVTLAILGVLALIAVPVAQVSMQRTR 53 # # # >BH2827 # Length = 102 # # Score = 31.2 bits (69), Expect = 2.0 # Identities = 12/24 (50%), Positives = 20/24 (83%) # # Query: 36 SGFSLVELIAVVMMVGILAAIALP 59 # +GF+LVE++ V+M++ IL +ALP # Sbjct: 9 AGFTLVEMMIVLMIISILLLVALP 32 # # # >VC1521 # Length = 677 # # Score = 31.2 bits (69), Expect = 2.0 # Identities = 22/60 (36%), Positives = 32/60 (52%), Gaps = 1/60 (1%) # # Query: 69 RVNKANDAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTIVDTPSKKR 128 # RV + DA+L I E R R L+YS V+ +I ++P + + T+V T SKKR # Sbjct: 481 RVEEEIDAILLQI-ERIRNITRSLLQYSRQGGVQDEITWQHVNPIIDESITLVKTGSKKR 539 # # # >XF0966 # Length = 185 # # Score = 31.2 bits (69), Expect = 2.0 # Identities = 18/64 (28%), Positives = 32/64 (49%) # # Query: 34 SDSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKL 93 # S G++L EL+ + ++ +L AI LP + + RQR+ + + A+ A Q+ # Sbjct: 3 SSRGYTLPELLITMALIALLTAIGLPFFKQTLERQRLENKMHLLSSQFAGARLAAITQQT 62 # # Query: 94 KYSV 97 # SV # Sbjct: 63 PVSV 66 # # # >PA0659_3 # Length = 77 # # Score = 30.8 bits (68), Expect = 2.9 # Identities = 13/28 (46%), Positives = 20/28 (71%) # # Query: 40 LVELIAVVMMVGILAAIALPGWSAFVNR 67 # L LI ++ +VGI+AAIALP + ++ R # Sbjct: 6 LASLIILLPIVGIIAAIALPSYQGYLER 33 # # # >mlr6822 # Length = 157 # # Score = 30.4 bits (67), Expect = 3.0 # Identities = 12/25 (48%), Positives = 21/25 (84%) # # Query: 36 SGFSLVELIAVVMMVGILAAIALPG 60 # +GF+LVE++ V+ ++ ++AAIA PG # Sbjct: 15 AGFTLVEMLVVLAIMALVAAIAAPG 39 # # # >YDR463w # Length = 577 # # Score = 30.4 bits (67), Expect = 3.3 # Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) # # Query: 150 LTSKNKVSTAVNASSTYLNTPQTITFDYIGSLTGLEFDPPAPTGSTAIPHIKIVVANN 207 # L+ +N++ + VNA S + P+ T I TG+ P +P+GST P V NN # Sbjct: 158 LSPENRIKSEVNAKSLLGSRPEQDTGAPIKMSTGVTSSPLSPSGST--PEHSTKVLNN 213 # # # >VC2730 # Length = 146 # # Score = 30.4 bits (67), Expect = 3.4 # Identities = 11/27 (40%), Positives = 22/27 (80%) # # Query: 33 QSDSGFSLVELIAVVMMVGILAAIALP 59 # + +GF+L+E++ VV+++GILA+ +P # Sbjct: 5 RKQTGFTLLEVMVVVVILGILASFVVP 31 # # # >YPO3425 # Length = 154 # # Score = 30.4 bits (67), Expect = 3.7 # Identities = 10/42 (23%), Positives = 25/42 (58%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVL 78 # GF+L+EL+ V ++ +L+ I +P + ++ + + A++ # Sbjct: 12 GFTLIELMVAVAIIAVLSGIGIPSYQRYIQKAALTDMLQAIV 53 # # # >RSc2310 # Length = 155 # # Score = 30.0 bits (66), Expect = 4.0 # Identities = 17/81 (20%), Positives = 38/81 (45%), Gaps = 4/81 (4%) # # Query: 35 DSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLK 94 # + GF+L+EL+ V++++G+LA + P + + + + A A I+ + + +L # Sbjct: 24 EGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAK----AQIESLGKALDQYRLD 79 # # Query: 95 YSVSFKVESQIPKIVIHPDSE 115 # E + + P S+ # Sbjct: 80 VGAYPSTEEGLDALNTRPQSQ 100 # # # >aq_1433 # Length = 119 # # Score = 30.0 bits (66), Expect = 4.0 # Identities = 15/49 (30%), Positives = 29/49 (58%), Gaps = 3/49 (6%) # # Query: 35 DSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQE 83 # + GF+LVE++ +M+V +LA +A+P + R N VL+ +++ # Sbjct: 4 EGGFTLVEVLVALMIVLVLAGLAIPLYEITFKR---NAMRAVVLSDLRQ 49 # # # >XF0539 # Length = 187 # # Score = 30.0 bits (66), Expect = 4.1 # Identities = 12/37 (32%), Positives = 24/37 (64%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKA 73 # GF+L+E++ +++ +L AI LP + +V + +V A # Sbjct: 7 GFTLLEVMVTLIVPAVLGAITLPLYQRYVAKTQVTAA 43 # # # >CAC2362 # Length = 637 # # Score = 30.0 bits (66), Expect = 4.4 # Identities = 28/118 (23%), Positives = 52/118 (43%), Gaps = 18/118 (15%) # # Query: 45 AVVMMVGILA---AIALPGWSAFVNRQRVNKAN------DAVLASIQEA----QRQAKRQ 91 # ++ +GIL A A P W A V + +N + DA+ ++EA ++ + + # Sbjct: 515 SIERFIGILIEHYAGAFPTWLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDVRNE 574 # # Query: 92 KLKYSVSFKVESQIPKIVIHPDSEAASTIVDTPSKKRWQVLG----EDLDIRSTGQIK 145 # K+ Y + ++P +++ D E I+ S+K LG ED R ++K # Sbjct: 575 KIGYKIREAQLKKVPYMIVIGDKEIKEGIISVRSRKEGD-LGSMNIEDFIFRINAEVK 631 # # # >RSc2302 # Length = 172 # # Score = 30.0 bits (66), Expect = 4.4 # Identities = 13/33 (39%), Positives = 21/33 (63%) # # Query: 37 GFSLVELIAVVMMVGILAAIALPGWSAFVNRQR 69 # GF+L+EL+ + +VGI+A +P V RQ+ # Sbjct: 20 GFTLIELVITLALVGIVAMAIVPLSELAVQRQK 52 # # # >BS_dnaX # Length = 563 # # Score = 30.0 bits (66), Expect = 4.9 # Identities = 40/163 (24%), Positives = 64/163 (38%), Gaps = 39/163 (23%) # # Query: 75 DAVLASIQEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDSEAASTIVDTPSKKRWQVLGE 134 # D ++ IQ+ +++ +R K + K ++ PK + + P + ++L E # Sbjct: 372 DMLMKKIQQLEQEVERLK---TTGIKAAAESPKKEAPRVPKGGKSNYKAPVGRIHEILKE 428 # # Query: 135 ----DLDIRSTGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGSLTGLEFDPPA 190 # DLD+ KLL +L +NKVS A LN + P # Sbjct: 429 ATRPDLDLLRNSWGKLLAHLKQQNKVSHA-----ALLNDSE-----------------PV 466 # # Query: 191 PTGSTAIP-------HIKIVVANNNVKRC---VILKTILGATM 223 # GS A H K+V +NN R IL+++LG M # Sbjct: 467 AAGSAAFVLKFKYEIHCKMVAEDNNGVRTNLEQILESMLGKRM 509 # # # >paaY # Length = 196 # # Score = 29.6 bits (65), Expect = 6.4 # Identities = 20/67 (29%), Positives = 34/67 (49%) # # Query: 39 SLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLKYSVS 98 # +LV + AVVM ++ ++ G SAFV + AN ++ S +A R+ Q+L + # Sbjct: 95 ALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQ 154 # # Query: 99 FKVESQI 105 # E Q+ # Sbjct: 155 GTHEYQV 161 # # # >CT327 # Length = 208 # # Score = 29.3 bits (64), Expect = 8.1 # Identities = 27/113 (23%), Positives = 48/113 (41%), Gaps = 11/113 (9%) # # Query: 82 QEAQRQAKRQKLKYSVSFKVESQIPKIVIHPDS--EAASTIVDTPSKKRWQVLGEDL--- 136 # ++++R +K KY V E + + P+ E I +T Q+ GED+ # Sbjct: 31 KDSRRCVSEEKAKYIVEAIQEGNSEPVGVFPEHSVEEILAITETTGITSIQLSGEDILFK 90 # # Query: 137 --DIRSTGQIKLLTNLTSKNKVSTAVNASSTYLNTPQTITFDYIGSLTGLEFD 187 # +R I + ++ S + S A+ +N T+ +D+IG G FD # Sbjct: 91 FSQLREHFSIFYVVSVYSNGQPSAALPP----MNDAVTVVYDHIGGERGSPFD 139 # # # >PA0678 # Length = 149 # # Score = 28.9 bits (63), Expect = 8.8 # Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 1/66 (1%) # # Query: 36 SGFSLVELIAVVMMVGI-LAAIALPGWSAFVNRQRVNKANDAVLASIQEAQRQAKRQKLK 94 # SGF+L+EL+ V+++VGI AAI+L R + A A L I + + + + + # Sbjct: 7 SGFTLIELMVVLVIVGIATAAISLSARPDPTGLLRQDAARLARLLEIAQGEARVRGTPIL 66 # # Query: 95 YSVSFK 100 # + S K # Sbjct: 67 WQPSAK 72 # # Database: myva Posted date: Sep 16, 2002 2:25 PM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.317 0.131 0.367 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,452,751 Number of Sequences: 192987 Number of extensions: 853493 Number of successful extensions: 3016 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 2924 Number of HSP's gapped (non-prelim): 109 length of query: 231 length of database: 59,019,183 effective HSP length: 106 effective length of query: 125 effective length of database: 38,562,561 effective search space: 4820320125 effective search space used: 4820320125 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits) S2: 63 (28.9 bits)
Open the original version of this page.
Usablenet Assistive is a UsableNet product. Usablenet Assistive Main Page.