| wiew.cgi?COG4791 | 15 proteins | U | COG4791 | Type III secretory pathway, component EscT | Help |
|---|---|---|---|---|---|
| 2 from | query genome Yersinia pestis (Enterobacteriales | Gammaproteobacteria) | ||||
| YPCD1.46 YPO0272 | |||||
264 letters (r) 0 0 1030 = ||| 1 YPO0272 (264) = 1 -7 513 = ||| 2 STM1421 (259) = 0 -6 335 = ||| 3 ECs4581 (258) = 0 -6 335 = ||| 3 ZescT (258) = 2 -5
299 = ||| 3 YPCD1.46 (261) = 2 -4 254 = || 3 PA1691 (262) = 14 5 179 = | 9 RSp0872 (282) = -2 -4 172 _ 18 CAC2148_1 (256) COG1684 0 -4 172 _ 21 BH2440 (258) COG1684 11 -6 160 = | 8 mlr6345 (272) = 5 0 159 = ||| 9 STM2888 (263) = 15 -2 157 = 3 CPn0823 (289) = 0 -4 149 _ 28 BS_fliR (259) COG1684 3 -6 142 _ || 15 VC2121 (260) COG1684 1 -14 142 _ | 12 AGc1028 (251) COG1684 20 -1 139 = 11 CT564 (289) = 5 -7 136 _ || 22 PA1448 (258) COG1684 -3 -4 134 _ 19 aq_1961 (258) COG1684 5 -5 127 _ ||| 21 YPO1819 (260) COG1684 10 -116 121 = ||| 5 ECs3723 (155) = 5 -116 120 = ||| 5 Z4187 (150) = 4 -8 114 _ | 24 Cj1179c (255) COG1684 5 -1 112 _ ||| 24 STM1981 (264) COG1684 4 -3 109 _ 14 TP0716 (265) COG1684 4 -13 109 _ | 15 BMEII0168 (255) COG1684 1 -14 108 _ | 20 SMc03055 (250) COG1684 5 -7 107 _ ||| 27 BU084 (258) COG1684 5 -4 106 _ | 26 RSp0373 (262) COG1684 4 -8 106 _ ||| 26 YPO0707 (257) COG1684 -2 -4 106 _ 24 lin0686 (253) COG1684 5 -10 99 _ | 25 HP0173 (255) COG1684 5 -4 97 _ ||| 24 fliR (261) COG1684 5 -4 96 _ ||| 24 ECs2689 (261) COG1684 5 -4 96 _ ||| 24 ZfliR (261) COG1684 5 -10 94 _ | 25 jhp0159 (255) COG1684 1 -13 92 _ | 31 CC1076 (251) COG1684 6 -8 89 _ 34 TM0910 (258) COG1684 -178 -8 79 = |||255 ECs3722 (78) = -178 -8 79 = |||255 Z4186 (78) = 1 -14 73 _ | 16 mlr2958 (250) COG1684 BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YPO0272 (264 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value YPO0272 401 e-112 STM1421 202 9e-52 ECs4581 133 4e-31 ZescT 133 4e-31 YPCD1.46 119 5e-27 PA1691 102 9e-22 RSp0872 74 4e-13 CAC2148_1 71 3e-12 BH2440 71 3e-12 mlr6345 66 6e-11 STM2888 66 9e-11 CPn0823 65 2e-10 BS_fliR 62 1e-09 VC2121 59 8e-09 AGc1028 59 9e-09 CT564 58 2e-08 PA1448 57 4e-08 aq_1961 56 7e-08 YPO1819 54 5e-07 ECs3723 51 2e-06 Z4187 51 3e-06 Cj1179c 49 1e-05 STM1981 48 2e-05 TP0716 47 6e-05 BMEII0168 47 6e-05 SMc03055 46 7e-05 BU084 46 1e-04 RSp0373 45 1e-04 YPO0707 45 1e-04 lin0686 45 1e-04 HP0173 43 7e-04 fliR 42 0.001 ECs2689 42 0.002 ZfliR 42 0.002 jhp0159 41 0.003 CC1076 40 0.005 TM0910 39 0.011 ECs3722 35 0.18 Z4186 35 0.18 mlr2958 33 0.91
# >YPO0272 # Length = 264 # # Score = 401 bits (1030), Expect = e-112 # Identities = 264/264 (100%), Positives = 264/264 (100%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII # Sbjct: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # # Query: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES # Sbjct: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # # Query: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFE 180 # SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFE # Sbjct: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFE 180 # # Query: 181 LCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL 240 # LCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL # Sbjct: 181 LCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL 240 # # Query: 241 SRMSDTEQKIGTLIPLIKGGNDVH 264 # SRMSDTEQKIGTLIPLIKGGNDVH # Sbjct: 241 SRMSDTEQKIGTLIPLIKGGNDVH 264 # # # >STM1421 # Length = 259 # # Score = 202 bits (513), Expect = 9e-52 # Identities = 120/234 (51%), Positives = 171/234 (72%), Gaps = 1/234 (0%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITN-SSPV 66 # L ALA+A +RP + L+LPL + SLG++LLRNG+++++ P+ P+ I+ + # Sbjct: 9 LIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDY 68 # # Query: 67 TWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVL 126 # +W+G++ E++IG +GF AA+PFWA++MAGFL+DTLRGATM T+FN + E+SLFG+L # Sbjct: 69 SWLGLVTGEVIIGFSIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLL 128 # # Query: 127 FTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFA 186 # F+Q L V+F ISGG +L LY SY LP G+ + L ++Q EW+ +++LC+ F+ # Sbjct: 129 FSQFLCVIFFISGGMEFILNILYESYQYLPPGRTLLFDQQFLKYIQAEWRTLYQLCISFS 188 # # Query: 187 LPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL 240 # LPA++ MVLADL+LGL+NRSA+QLNVFF +MP+KS L L LLIS PY LHHYL # Sbjct: 189 LPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHHYL 242 # # # >ECs4581 # Length = 258 # # Score = 133 bits (335), Expect = 4e-31 # Identities = 81/230 (35%), Positives = 139/230 (60%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # M +++ + + ++RP G+ +ILP+F+ L S+ +RN +++A LP+ + # Sbjct: 1 MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK 60 # # Query: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # S G+ E+ IG +G + FWA++ AG +IDTLRG+T+S++FNP + S # Sbjct: 61 LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSS 120 # # Query: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFE 180 # S+ GV+ Q ++V+F+I GG +L LY SY+ LP+ I L+ FL + W + # Sbjct: 121 SITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK 180 # # Query: 181 LCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # L L F++P ++ + L D+ G +N++A QLNVF L++P+KS +A+F+LL+ # Sbjct: 181 LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLL 230 # # # >ZescT # Length = 258 # # Score = 133 bits (335), Expect = 4e-31 # Identities = 81/230 (35%), Positives = 139/230 (60%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # M +++ + + ++RP G+ +ILP+F+ L S+ +RN +++A LP+ + # Sbjct: 1 MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK 60 # # Query: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # S G+ E+ IG +G + FWA++ AG +IDTLRG+T+S++FNP + S # Sbjct: 61 LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSS 120 # # Query: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFE 180 # S+ GV+ Q ++V+F+I GG +L LY SY+ LP+ I L+ FL + W + # Sbjct: 121 SITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK 180 # # Query: 181 LCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # L L F++P ++ + L D+ G +N++A QLNVF L++P+KS +A+F+LL+ # Sbjct: 181 LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLL 230 # # # >YPCD1.46 # Length = 261 # # Score = 119 bits (299), Expect = 5e-27 # Identities = 91/252 (36%), Positives = 143/252 (56%), Gaps = 2/252 (0%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVT 67 # L L + R +ILP+ + + LG LLRNG++ ++AL V P + P I + T # Sbjct: 10 LLTYTLLLPRFMACFVILPVLSKQLLGGVLLRNGIVCSLALYVYPAVANQPYIEVDA-FT 68 # # Query: 68 WIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLF 127 # + ++ E+++G+++GFVA +PFWA+ AGF++D RGA M++L NPG+ ++S G+L # Sbjct: 69 LMLLIGKEIILGLLIGFVATIPFWALESAGFIVDNQRGAAMASLLNPGLDSQTSPTGLLL 128 # # Query: 128 TQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLL-FLQTEWQMMFELCLCFA 186 # TQ L +F G F +L+AL+ SY + P+ ++ + F ++ + + A # Sbjct: 129 TQTLITIFFSGGAFLSLLSALFHSYVNWPVASFFPAVSEQWVDFFYNQFSQILLIAAVLA 188 # # Query: 187 LPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYLSRMSDT 246 # P L+ M LA+ L LI+R A LNVF LAMPIKSA+A LL+I + H M # Sbjct: 189 APLLIAMFLAEFGLALISRFAPSLNVFVLAMPIKSAIASLLLVIYCMQMMSHASKAMLLV 248 # # Query: 247 EQKIGTLIPLIK 258 # I LIP+++ # Sbjct: 249 MDPISLLIPVLE 260 # # # >PA1691 # Length = 262 # # Score = 102 bits (254), Expect = 9e-22 # Identities = 81/216 (37%), Positives = 122/216 (55%), Gaps = 6/216 (2%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSA--PIITNSSP 65 # L +L + R ++LP+ ++LG L+RNG+ ++AL P+ + P + # Sbjct: 10 LLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGVACSLALFAYPIVAGSLPPALGALDI 69 # # Query: 66 VTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGV 125 # IG E+L+G+++GFVA +PFWAM GF+ID RGA +++ FNP +G ++S G+ # Sbjct: 70 ALLIG---KEVLLGLLIGFVATIPFWAMEATGFIIDNQRGAALASTFNPSLGSQTSPTGL 126 # # Query: 126 LFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGI-QPAADLLLFLQTEWQMMFELCLC 184 # L TQ L LF G F ++ +L+ SY S P+ Q + + F ++ M LC # Sbjct: 127 LLTQTLITLFFSGGAFLALVGSLFRSYASWPVSSFFPQLGSQWVAFFYAQFSQMLMLCAL 186 # # Query: 185 FALPALLVMVLADLSLGLINRSARQLNVFFLAMPIK 220 # FA P L+ M LA+ L L++R A LNVF LAMPIK # Sbjct: 187 FAAPLLIAMFLAEFGLALVSRFAPSLNVFILAMPIK 222 # # # >RSp0872 # Length = 282 # # Score = 73.6 bits (179), Expect = 4e-13 # Identities = 67/228 (29%), Positives = 112/228 (48%), Gaps = 13/228 (5%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVT---PLFLSAPIITNSS 64 # L LAL+ +R + ILP T + + + RNG++ A+A+ V P+ L+A + S # Sbjct: 22 LVLLALSCVRIMTLFSILPA-TNDQMLTGIARNGVVYALAILVAAGQPVGLAAHL----S 76 # # Query: 65 PVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFG 124 # + C E+ +G +GF A+ FW AG LID + G + NP G +++ G # Sbjct: 77 AGQLFMLTCKEIFLGACLGFAASTVFWVAETAGTLIDNVSGFNNVQMTNPLRGDQNTPIG 136 # # Query: 125 VLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGI---QPAADLLLFLQTEWQMMFEL 181 # + LF +GG +L ++ S+ P+G + A L QT+ +F # Sbjct: 137 NTLVNLAVTLFYAAGGMLFLLGVVFESFKWWPLGAALPDMNAVAQSFLLQQTD--SIFST 194 # # Query: 182 CLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLL 229 # + A P ++ M+L D +GL+ R+A +L L PIK A+AL +++ # Sbjct: 195 AVKLAAPVMMTMLLIDAGIGLLARAADKLEPTSLGQPIKGAVALLMVM 242 # # # >CAC2148_1 # Length = 256 # # Score = 70.9 bits (172), Expect = 3e-12 # Identities = 62/225 (27%), Positives = 111/225 (48%), Gaps = 2/225 (0%) # # Query: 9 TALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTW 68 # T+L + +R + + L + +SL ++ ++ L + I+ V P + + ++ + # Sbjct: 7 TSLFMVFLRVFAFFIALQVMFPKSLPNT-VKVMLSLCISFFVMPYINLSQVSALNNGFLY 65 # # Query: 69 IGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFT 128 # E+L G+++GF A L F + + G +D G +M T ++P +SL # Sbjct: 66 TWQCICEILTGLILGFFANLMFLGVKIGGQFLDFQIGYSMMTAYDPSSESNASLIERFLN 125 # # Query: 129 QILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALP 188 # VLF GG V+ L S++S+ +G + +++ Q F + ALP # Sbjct: 126 MFSVVLFFSIGGHEVVIKELVSSFNSVKLGTFVINDQSVMVAFNVFVQ-FFVIGFKIALP 184 # # Query: 189 ALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +LV+++ D+ +GL++R+ QLNV L MPIK L L L+I LP # Sbjct: 185 VVLVLLITDIVMGLMSRTVPQLNVMILGMPIKILLGLTCLMIILP 229 # # # >BH2440 # Length = 258 # # Score = 70.9 bits (172), Expect = 3e-12 # Identities = 60/232 (25%), Positives = 120/232 (50%), Gaps = 6/232 (2%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # M D + L L +R L+ +PLF+ R++ ++ + G+ + +A +T I+ # Sbjct: 1 MVDWIQLLPMFLLVFVRMLAFLMTMPLFSYRNI-PAMFKVGIALFLAWILTFSLEPEIIL 59 # # Query: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # + T++ ++ E+L+G+++G +A + +A+ AG ID G ++ + +P G +S # Sbjct: 60 FDG---TYVILIMKEVLVGLMVGLIAMVLLYAIQAAGAFIDVKIGFLIANIVDPQTGAQS 116 # # Query: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAAD--LLLFLQTEWQMM 178 # L G + L + G + ++ +Y SY +P+ Q +D ++ + T M # Sbjct: 117 PLIGSYLYTFALLFMLATNGHHLLIDGMYYSYQFIPLNQPFLNVSDENMIELIATTLNTM 176 # # Query: 179 FELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # F + A P + + L D++LG+++R+ Q+NVF + MP+K + L LL+I # Sbjct: 177 FIIAFQMAFPLVGSLFLVDVALGMVSRAVPQMNVFVVGMPLKILVGLPLLMI 228 # # # >mlr6345 # Length = 272 # # Score = 66.2 bits (160), Expect = 6e-11 # Identities = 70/237 (29%), Positives = 107/237 (44%), Gaps = 17/237 (7%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALP----VTPLFLSAPIITNS 63 # + A L R GI++ILP+FT RS L+R L V LP V+ + T # Sbjct: 19 VVAAGLGAARAIGIMMILPVFT-RSQTDGLIRGCLAVGFGLPCLAHVSDALQALDPETRL 77 # # Query: 64 SPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATM-STLFNPGMGVESSL 122 # V +G+ E+L+G ++G +P W + AG ID RG T S +P ++S # Sbjct: 78 IEVALLGL--KEVLVGALLGTFLGIPLWGLQAAGEFIDNQRGVTNPSAPTDPATNSQASA 135 # # Query: 123 FGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQ-----GIQPAADLLLFLQTEWQM 177 # GV +F+ SGG ++ ALYGSY P+ + Q A ++L L # Sbjct: 136 MGVFLGITAIAIFVASGGLETLIGALYGSYLIWPVYKFYPTLSTQGAMEVLGLL----DQ 191 # # Query: 178 MFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPY 234 # + L + P + M L D+S L+ R A Q + L+ IK+ + L++ Y # Sbjct: 192 IMRTALLVSGPVVFFMTLIDVSFMLLRRFAPQFKLTQLSPAIKNLVFPILMVTYAGY 248 # # # >STM2888 # Length = 263 # # Score = 65.9 bits (159), Expect = 9e-11 # Identities = 69/225 (30%), Positives = 118/225 (51%), Gaps = 10/225 (4%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLS-APIITNSSPV 66 # + + AL R I LP + L S RN +I+ +AL V P L+ AP + V # Sbjct: 13 VASAALGFARVAPIFFFLPFLNSGVL-SGAPRNAIIILVALGVWPHALNEAPPFLS---V 68 # # Query: 67 TWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVL 126 # I ++ E +GV++G + + PFW M+ G +ID RGAT+S+ +P G+++S # Sbjct: 69 AMIPLVLQEAAVGVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANF 128 # # Query: 127 FTQILTVLFLISGGFNQVLAALYGSYDSL-PIGQGIQPAADLLLFLQTEWQMMFELCLCF 185 # V++L +GG ++ L SY P+ + LL F+ Q L # Sbjct: 129 LNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPMNECTPSLPPLLTFINQVAQN----ALVL 184 # # Query: 186 ALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # A P +LV++L+++ LGL++R A Q+N F +++ +KS +A+ ++L+ # Sbjct: 185 ASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLL 229 # # # >CPn0823 # Length = 289 # # Score = 65.1 bits (157), Expect = 2e-10 # Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 16/222 (7%) # # Query: 24 ILPLFT-ARSLGSSLLRNGLIVAIALP----VTPLFLSAPIITNSSPVTWIGVLCT-ELL 77 # +LP+F A LG+ L + + + I+L + P L+ ITN VL E++ # Sbjct: 39 LLPIFAVAPFLGAKLFPSPIKIGISLSWLAIIFPKVLADTQITNYMDNNLFYVLLVKEMI 98 # # Query: 78 IGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVE-SSLFGVLFTQILTVLFL 136 # IG+V+GFV A PF+A AG I +G + +E +S G+L+ +T++F # Sbjct: 99 IGIVIGFVLAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGILYHYFVTIIFW 158 # # Query: 137 ISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELC-LCFAL------PA 189 # + GG V++ L + + +PI A+++ W M ++C LC + PA # Sbjct: 159 LVGGHRIVISLLLQTLEVIPIHSFF--PAEMMSLSAPIWITMIKMCQLCLVMTIQLSAPA 216 # # Query: 190 LLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLIS 231 # L M+++DL LG+INR A Q+ V +L +K+ + L L ++ # Sbjct: 217 ALAMLMSDLFLGIINRMAPQVQVIYLLSALKAFMGLLFLTLA 258 # # # >BS_fliR # Length = 259 # # Score = 62.0 bits (149), Expect = 1e-09 # Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 5/234 (2%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPII 60 # M ++ A L +R + +PLF R++ ++ R G +A+ P + # Sbjct: 1 MNSIIDLFPAFLLVFIRISAFFVTIPLFGHRNV-PAVHRIGFAFFLAVICFSTIDKPPSL 59 # # Query: 61 TNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVES 120 # + E L+G+ +G +A + A+ +AG ID G +++ + +P G +S # Sbjct: 60 EIDEHYMLLAF--KEALVGLCLGLIAYMMIAAVQIAGSFIDFQMGFSIANVIDPQTGAQS 117 # # Query: 121 SLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAAD--LLLFLQTEWQMM 178 # L G + + L + +L +Y S+ + + Q D F+ M # Sbjct: 118 PLIGQFIYTMALLFMLSVNAHHLLLDGIYYSFQYISVDQAFPNFGDEQFAYFIAKSLNAM 177 # # Query: 179 FELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISL 232 # F + + P + + L DL+LG++ R+ QLNVF + +P+K A++ +L++ + # Sbjct: 178 FIIAFQMSAPVVASLFLVDLALGIVARTVPQLNVFVVGLPLKIAVSFIMLIVCM 231 # # # >VC2121 # Length = 260 # # Score = 59.3 bits (142), Expect = 8e-09 # Identities = 58/235 (24%), Positives = 104/235 (43%), Gaps = 1/235 (0%) # # Query: 22 LLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGVV 81 # +L++ T + +R L +A+ V P + P + + +++IGV # Sbjct: 25 MLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLSLQGFMITFEQIVIGVA 84 # # Query: 82 MGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGF 141 # MG V M G ++ +++ +P G + L G LF + T+ FL+S G # Sbjct: 85 MGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLFMLLATLFFLVSDGH 144 # # Query: 142 NQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLG 201 # +++ + S+ SLPIG G D L +MF+ L +L ++ ++ +LS G # Sbjct: 145 LKMIQLVVFSFKSLPIGSGSLTTVDFRE-LALWLGIMFKASLAVSLSGIIALLTVNLSFG 203 # # Query: 202 LINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYLSRMSDTEQKIGTLIPL 256 # ++ R+A QLN+F L + L L + HY + E+++ LI L # Sbjct: 204 VMTRAAPQLNIFSLGFSFALLVGLLLCWYIVHGLYTHYDIYWQEAEEQVCRLIRL 258 # # # >AGc1028 # Length = 251 # # Score = 59.3 bits (142), Expect = 9e-09 # Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 4/234 (1%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSA--P 58 # +TD + AL LA+ R + +P F++ + S +R L VA+++ + P+ P # Sbjct: 2 ITDPQGTIIALFLAICRIGACFMTMPGFSSSRI-SPQIRMLLCVAVSMALLPVLWDTIYP 60 # # Query: 59 IITNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGV 118 # ++ +S +G++ +E+LIG + G +A G LI G + +P V # Sbjct: 61 KVSGASQGAVVGLIFSEVLIGAMYGLIARFYTLGFQFTGALIGASIGLSAPGGADPIEDV 120 # # Query: 119 ESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMM 178 # + + T ++ + + VL AL SY + P+G I +L+ L + # Sbjct: 121 QENQIANFITFGGLLVLFMMDFHHIVLKALVDSYSATPVGALIS-GQKMLITLTDTLRAS 179 # # Query: 179 FELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISL 232 # F + L A P ++ ++ ++++GLIN+ A Q+ VFF++ P A LF+L +S+ # Sbjct: 180 FSIMLRLASPFVIYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSV 233 # # # >CT564 # Length = 289 # # Score = 58.2 bits (139), Expect = 2e-08 # Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 10/231 (4%) # # Query: 9 TALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTW 68 # T L R +L I+P A+ S + + + L + + + I+ + # Sbjct: 29 TVFLLLAARILSMLSIIPFLGAKLFPSPIKIGIALSWMGLLLPQVIQDSTIVHYQDLDIF 88 # # Query: 69 IGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVE-SSLFGVLF 127 # +L E+LIGV++GF+ + PF+A AG I +G + +E +S G+ + # Sbjct: 89 YILLIKEILIGVLIGFLFSFPFYAAQSAGSFITNQQGIQGLEGATSLVSIEQTSPHGIFY 148 # # Query: 128 TQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELC-LCFA 186 # +T++F ++GG +L+ L S + +P+ + P + ++ W + ++C LC # Sbjct: 149 HYFVTIVFWLAGGHRIILSVLLQSLEIIPL-HAVFPES-MMSLRAPMWIAILKMCQLCLI 206 # # Query: 187 L------PALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLIS 231 # + PA + M+++DL LG+INR A Q+ V +L +K+ + L L ++ # Sbjct: 207 MTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIYLLSALKAFMGLLFLTLA 257 # # # >PA1448 # Length = 258 # # Score = 57.0 bits (136), Expect = 4e-08 # Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 4/232 (1%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVT 67 # + + L + R +L+ +P+ + L +R L + + + + P S P + ++ + # Sbjct: 13 IASFVLPLFRVAALLMTMPVIGTQ-LVPVRVRLYLALGVCVVLVPNLPSMPQV-DALSMK 70 # # Query: 68 WIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLF 127 # + ++ ++L+G ++GF L F A +AG +I G +++ +P GV + G F # Sbjct: 71 AMLLIGEQILVGALLGFSLQLLFHAFVIAGQIISMQMGLGFASMVDPANGVSVPVLGQFF 130 # # Query: 128 TQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFAL 187 # T ++T+LFL G V + S+ +LP+G+G+ ++ + W M L L # Sbjct: 131 TMLVTLLFLAMNGHLVVFEVIAESFVTLPVGEGLSGNHFWIIAGKLGWVMGAALLLALPA 190 # # Query: 188 PALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHY 239 # L++V +L+ G + R+A QLN+F + P+ L L +L I L Y # Sbjct: 191 ITALLVV--NLAFGAMTRAAPQLNIFSIGFPLTLVLGLVILWIGTADLLSQY 240 # # # >aq_1961 # Length = 258 # # Score = 56.2 bits (134), Expect = 7e-08 # Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 13/201 (6%) # # Query: 27 LFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLC---TELLIGVVMG 83 # LFT GS L+ N + + +A ++ LS IT T++ L ELL G G # Sbjct: 24 LFTFPFYGSFLIPNTIRLYLAFALSFAVLSFINITPVKVNTFVEFLVYALNELLFGFSAG 83 # # Query: 84 FVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQ 143 # + L F A+ +AG LI G +F PGM + SLF FT T++FL GG # Sbjct: 84 LILRLLFDALIIAGELIALHTGLGFLQMFIPGM-TQMSLFSGFFTLYGTLIFLSLGGGEF 142 # # Query: 144 VLAALYGSYDSLPIGQ----GIQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLS 199 # ++ L S+ LP+G + P L F ++ F L + A+P +L ++ +L # Sbjct: 143 IILGLAESFKRLPVGSFNIFYLNPEVFLNFFYES-----FRLGVKIAMPLILTALILNLV 197 # # Query: 200 LGLINRSARQLNVFFLAMPIK 220 # L ++NR Q+NVF + +P++ # Sbjct: 198 LAVVNRFIPQMNVFMVGLPLQ 218 # # # >YPO1819 # Length = 260 # # Score = 53.5 bits (127), Expect = 5e-07 # Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%) # # Query: 15 MMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCT 74 # ++R ++ PL + + + ++ GL V I + P I SS W+ + # Sbjct: 20 LVRVLALIGTAPLLSEKQINKK-VKIGLGVLITFLIAPSLPPVNIPLFSSAALWVAI--Q 76 # # Query: 75 ELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVL 134 # ++LIGV +G F A+ ++G +I G + +T F+P G + L ++T+L # Sbjct: 77 QILIGVALGVTMQFAFAAVRLSGEVIGLQMGLSFATFFDPSGGPNMPVLSRLLNILVTLL 136 # # Query: 135 FLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMV 194 # FL G +++ L S+ +LPI Q + L L M+F L ALP + +++ # Sbjct: 137 FLSFDGHLWLISLLADSFHTLPI-QFAPLNGNGFLTLAQSGSMIFMNGLMLALPLITLLL 195 # # Query: 195 LADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +++LG++NR QL+VF + P+ + + L + +P # Sbjct: 196 TLNMALGMLNRMTPQLSVFVIGFPLTLTVGIISLGLIMP 234 # # # >ECs3723 # Length = 155 # # Score = 51.2 bits (121), Expect = 2e-06 # Identities = 38/141 (26%), Positives = 68/141 (47%), Gaps = 3/141 (2%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVT 67 # L A AL R +LP F + ++ +++R+ +I+ ++ + + N + # Sbjct: 18 LAATALGFCRLAPTFYLLPFFASGNI-PTVVRHPIIIVVSCALVQHYHYELSTLNEIDIA 76 # # Query: 68 WIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLF 127 # + E++IG+ + + A PFW G ID RGAT+S+ +P GV++S LF # Sbjct: 77 LLAA--REIIIGLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLF 134 # # Query: 128 TQILTVLFLISGGFNQVLAAL 148 # ++L +GG N +L L # Sbjct: 135 NLFSAAVYLTNGGLNFILETL 155 # # # >Z4187 # Length = 150 # # Score = 50.8 bits (120), Expect = 3e-06 # Identities = 38/141 (26%), Positives = 68/141 (47%), Gaps = 3/141 (2%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVT 67 # L A AL R +LP F + ++ +++R+ +I+ ++ + + N + # Sbjct: 13 LAATALGFCRLAPTFYLLPFFASGNI-PTVVRHPIIIVVSCALVQHYHYELSTLNEIDIA 71 # # Query: 68 WIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLF 127 # + E++IG+ + + A PFW G ID RGAT+S+ +P GV++S LF # Sbjct: 72 LLAA--REIIIGLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLF 129 # # Query: 128 TQILTVLFLISGGFNQVLAAL 148 # ++L +GG N +L L # Sbjct: 130 NLFSAAVYLTNGGLNFILETL 150 # # # >Cj1179c # Length = 255 # # Score = 48.5 bits (114), Expect = 1e-05 # Identities = 51/227 (22%), Positives = 110/227 (47%), Gaps = 5/227 (2%) # # Query: 13 LAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVL 72 # L + R G+++ P F+ S+ ++++ +++ + + + PL + +S ++ L # Sbjct: 17 LLLARMGGLIVFFPFFSHNSI-PMVIKSTIVLFLTMYLYPLARLESLHLDS---FFVLQL 72 # # Query: 73 CTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILT 132 # +E++ G++ G + + F + MAG I G TM+++ +P G + + + # Sbjct: 73 ISEVIFGMIAGLMLQIIFAIIMMAGEQIAFTMGFTMASILDPSSGTSMPITSQILNLLAL 132 # # Query: 133 VLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLV 192 # + FL G + +L L S + +G G P +L+ +L +F + + P L + # Sbjct: 133 MFFLAFDGHHLMLLFLSHSLGYISLG-GFYPHENLMHYLNMGMFNIFIIGFTMSFPILGI 191 # # Query: 193 MVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHY 239 # +LAD+ GL+ ++ Q N+ + PIK AL +L+ L + ++ # Sbjct: 192 SLLADVIFGLLMKTMPQFNLLVIGYPIKIALGFVVLIAILLVMMQYF 238 # # # >STM1981 # Length = 264 # # Score = 47.8 bits (112), Expect = 2e-05 # Identities = 52/219 (23%), Positives = 106/219 (47%), Gaps = 4/219 (1%) # # Query: 15 MMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCT 74 # ++R ++ P+ + R++ ++ GL + I L + P + S W+ + # Sbjct: 20 LLRVLALISTAPILSERAIPKR-VKLGLGIMITLVIAPSLPANDTPLFSIAALWLAM--Q 76 # # Query: 75 ELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVL 134 # ++LIG+ +GF F A+ AG I G + +T +PG + + + + +L # Sbjct: 77 QILIGIALGFTMQFAFAAVRTAGEFIGLQMGLSFATFVDPGSHLNMPVLARIMDMLAMLL 136 # # Query: 135 FLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMV 194 # FL G +++ L ++ +LPIG ++ + L ++F L ALP + +++ # Sbjct: 137 FLTFNGHLWLISLLVDTFHTLPIGSN-PVNSNAFMALARAGGLIFLNGLMLALPVITLLL 195 # # Query: 195 LADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +L+LGL+NR A QL++F + P+ + + L+ +P # Sbjct: 196 TLNLALGLLNRMAPQLSIFVIGFPLTLTVGIMLMAALMP 234 # # # >TP0716 # Length = 265 # # Score = 46.6 bits (109), Expect = 6e-05 # Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 2/230 (0%) # # Query: 13 LAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVL 72 # LA +R + ++ +PL + S ++R L IA V PL AP+ ++ +L # Sbjct: 17 LAAVRVFALMFTVPLL-SVRSVSRVVRVALAGLIAFLVLPLAYPAPMQVREFSAYYVLLL 75 # # Query: 73 CTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILT 132 # E L+G++ GF ++ F + AG G S +++ +E+ L G + # Sbjct: 76 LGEGLLGILTGFFISVIFTTFSAAGQFFSYQMGFGTSEMYDTFAQIENPLMGQFLNFVAM 135 # # Query: 133 VLFLISGGFNQV-LAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALL 191 # ++FL GF + L + S+ ++ ++ LLLF +F + ALP + # Sbjct: 136 LVFLQIKGFQILFLGGVLRSFQAVNCFVFLRKQEALLLFFTKALSALFLHAMTIALPIMG 195 # # Query: 192 VMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYLS 241 # ++L +S+GL+ ++A Q+N+ +P+ + LL + LPY ++ ++S # Sbjct: 196 ALLLIHVSMGLLTKAAPQMNLLSEGLPLTIVVTFVLLSVILPYMINLFVS 245 # # # >BMEII0168 # Length = 255 # # Score = 46.6 bits (109), Expect = 6e-05 # Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 8/230 (3%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNS---- 63 # + A LA R L+++P ++ + L+ L +A+A L L I + # Sbjct: 12 ILAAVLAFCRIGACLMLMPGISSARIP---LQVRLFIALACSFAVLLLVLQRIVTAVDAG 68 # # Query: 64 SPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLF 123 # P T ++ E+ IG ++G +A + FWA+ ++ G + S + + # Sbjct: 69 QPWTLFRLMVGEMFIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSITENEPQATL 128 # # Query: 124 GVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCL 183 # + T LF ++ ++ AL SY ++P+ +P A ++ F F L # Sbjct: 129 ATIVTFSALFLFFVTDMHLEIFRALLNSYVAIPVDGRFRPDAAMIDFTDA-LSAAFLATL 187 # # Query: 184 CFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # A P ++ +L + ++GL+N+ + V+F++MP L ++ LP # Sbjct: 188 RIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILP 237 # # # >SMc03055 # Length = 250 # # Score = 46.2 bits (108), Expect = 7e-05 # Identities = 61/238 (25%), Positives = 110/238 (45%), Gaps = 13/238 (5%) # # Query: 1 MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLS--AP 58 # +TD + AL A R G ++I+P F+ + +R + VA+++ + P+ + P # Sbjct: 2 ITDPEGMVLALFAAFCRIGGCVMIMPGFSTARVPMQ-IRLFIAVALSMAILPIMWTDIYP 60 # # Query: 59 IITNSSPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRG----ATMSTLFNP 114 # +T ++ ++ TE IG V+G VA + AG I L G L + # Sbjct: 61 QVTGKGH-DYLYLVATETAIGAVIGLVARYYVLGLQFAGTAITMLMGFGSPPAADVLEDT 119 # # Query: 115 GMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTE 174 # +S+ G IL +L + + A+ SY +PIG G P L+ + # Sbjct: 120 AENQLTSMIGFAGLMILFMLDF----HHVIFEAIAQSYRVMPIGAGFDPQGTLITLTNSL 175 # # Query: 175 WQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISL 232 # Q F + L A P ++ +L ++++G++N+ A Q+ V+F++ P LFLL + + # Sbjct: 176 GQ-TFMIMLRLASPFVIYGLLFNVAIGMVNKLAPQIPVYFISQPYLIMGGLFLLYLGI 232 # # # >BU084 # Length = 258 # # Score = 45.8 bits (107), Expect = 1e-04 # Identities = 48/221 (21%), Positives = 101/221 (44%), Gaps = 8/221 (3%) # # Query: 15 MMRPYGILLILPLFTARSLG--SSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVL 72 # M+R + P+F + + S +L +G+I + P P + T ++ # Sbjct: 20 MIRVLSFFSVAPIFKEKLINRKSKILLSGMISWLVWPFLP-----EVHTVLFSYFGFLLI 74 # # Query: 73 CTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILT 132 # ++LIG+V+GF A L F +N++G +I G + +T FN + +S+ + # Sbjct: 75 LQQILIGIVLGFTAQLLFATINLSGEIIGLQMGLSFATFFNNNSQIGTSIISRFLNILAL 134 # # Query: 133 VLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLV 192 # +F+ +++ + S+ S+PI G ++ L +F L LP +++ # Sbjct: 135 FVFITLNMHLYLISIVIDSFYSMPI-DGYFLNVNIFFILLKFSSSIFLNGLLLVLPIMII 193 # # Query: 193 MVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # ++ + L+NR + Q+++F + P+ L + +L +P # Sbjct: 194 LLSISFVMSLLNRLSPQISIFSIGFPLNLILGMLMLYFLIP 234 # # # >RSp0373 # Length = 262 # # Score = 45.4 bits (106), Expect = 1e-04 # Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 7/220 (3%) # # Query: 15 MMRPYGILLILPLFTARSLGSSL-LRNGLIVAIAL-PVTPLFLSAPIITNSSPVTWIGVL 72 # ++R + + P F + +S+ + G+++ +AL P+ P + A I S WI +L # Sbjct: 20 LVRVLAFIAVAPPFANTEIPTSIKVAFGVVLTVALAPMLP--VPAGISVGSYEGLWITLL 77 # # Query: 73 CTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILT 132 # ++ IG+ +G + F A++ AG L+ G +TL +P S L G + # Sbjct: 78 --QVAIGMALGVCVQMVFAAISGAGELMSIQIGLGFATLLDPQQTESSLLLGRFISLTAI 135 # # Query: 133 VLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLV 192 # F+ G ++ AL+ S+ LP+ A L +F L + ALP + + # Sbjct: 136 TAFIAGDGHLVLMHALFDSFTVLPVSAA-PLAGGGWQTLAGGGAAVFALAVRIALPIIAI 194 # # Query: 193 MVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISL 232 # M++ +L+ +++R+A+ LN F + + + L L+++ + # Sbjct: 195 MMVVNLAFAVLSRTAQALNPFAVGIAATLVVGLMLVMVMM 234 # # # >YPO0707 # Length = 257 # # Score = 45.4 bits (106), Expect = 1e-04 # Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 3/212 (1%) # # Query: 8 LTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVT 67 # L AL L +R L P+ ++ + + G + +A+ +TP+ + + # Sbjct: 12 LFALWLPFVRILSFLHFCPVIRHKAF-TRKAKIGTALLLAILITPMISQPVVSGELLSIE 70 # # Query: 68 WIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLF 127 # + + ++L G + G + L A+ AG ++ G M+ + +P G +++ + # Sbjct: 71 NLLLAGEQILWGWLFGSMLHLVLAALEAAGQILSMNMGLGMAMMNDPTSGASTAVISQII 130 # # Query: 128 TQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFAL 187 # ++F G + L S+ S PIG+ I + L L W + AL # Sbjct: 131 FTFSVLIFFTLNGHLLFVTILLKSFSSWPIGEAINDFSLRSLALSLGW--ILSSATLLAL 188 # # Query: 188 PALLVMVLADLSLGLINRSARQLNVFFLAMPI 219 # P +M++ S GL+NR + LN+F L PI # Sbjct: 189 PTTFIMLIVQGSFGLLNRISPTLNLFSLGFPI 220 # # # >lin0686 # Length = 253 # # Score = 45.4 bits (106), Expect = 1e-04 # Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 5/224 (2%) # # Query: 10 ALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWI 69 # A+ + R L PL R++ +S ++ +AI++PV + I T + + # Sbjct: 8 AVVIVFSRVASFLFFFPLLKGRNIPNS-VKVVFGMAISIPVATGVDVSGITTLPDLLLRV 66 # # Query: 70 GVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQ 129 # +E++ G+ + + + MAGF+ID G + L +P G ++S+ + # Sbjct: 67 ---TSEVVFGLALAKLVEIIAVIPKMAGFMIDYDLGFSQVNLIDPSYGTQNSITAAILDT 123 # # Query: 130 ILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPA 189 # V+FL G + ++ L S++ I + L + ALP # Sbjct: 124 FFVVIFLSLQGMDYLIYYLMKSFE-FTASVSILFEKGFIDLLLGTLGFALASAVSIALPI 182 # # Query: 190 LLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # + + + ++ L I++SA Q+N+F A IK +F+L ++P # Sbjct: 183 MGSIFIVNIVLAFISKSAPQINIFMNAFIIKITFGIFILACAVP 226 # # # >HP0173 # Length = 255 # # Score = 42.7 bits (99), Expect = 7e-04 # Identities = 49/227 (21%), Positives = 103/227 (44%), Gaps = 8/227 (3%) # # Query: 6 PGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNS-- 63 # P + L +R G+L P F + L+ + A++L V+ +F +N+ # Sbjct: 11 PHVRDFFLLFLRVSGVLSFFPFFE-----NHLVPLSVRGALSLYVSAIFYPTLEFSNAAY 65 # # Query: 64 SPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLF 123 # +P +I EL +GV + F ++ A I G TM++ ++P G + + # Sbjct: 66 TPEGFIIACLCELFLGVCASVFLQIVFASLVFATDSISFSMGLTMASAYDPISGSQKPIV 125 # # Query: 124 GVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCL 183 # G + ++ L +Q++ + S ++P+GQ + A L + + +F + # Sbjct: 126 GQALLLLAILILLDLSFHHQIILFVDHSLKAVPLGQFVFEPA-LAKNIVKAFSHLFVIGF 184 # # Query: 184 CFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # A P L +++L+D+ G+I ++ Q N+ + P+K A+ +++ # Sbjct: 185 SMAFPILCLVLLSDIIFGMIMKTHPQFNLLAIGFPVKIAIGFVGIIL 231 # # # >fliR # Length = 261 # # Score = 42.0 bits (97), Expect = 0.001 # Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 4/219 (1%) # # Query: 15 MMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCT 74 # ++R ++ P+ + RS+ ++ GL + I + P + + S W+ V # Sbjct: 20 LLRVLALISTAPILSERSVPKR-VKLGLAMMITFAIAPSLPANDVPVFSFFALWLAV--Q 76 # # Query: 75 ELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVL 134 # ++LIG+ +GF F A+ AG +I G + +T +P + + + + +L # Sbjct: 77 QILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLL 136 # # Query: 135 FLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMV 194 # FL G +++ L ++ +LPIG G ++ L L ++F L ALP + +++ # Sbjct: 137 FLTFNGHLWLISLLVDTFHTLPIG-GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLL 195 # # Query: 195 LADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +L+LGL+NR A QL++F + P+ + + L+ +P # Sbjct: 196 TLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMP 234 # # # >ECs2689 # Length = 261 # # Score = 41.6 bits (96), Expect = 0.002 # Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 4/219 (1%) # # Query: 15 MMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCT 74 # ++R ++ P+ + RS+ ++ GL + I + P + + S W+ V # Sbjct: 20 LLRVLALISTAPILSERSVPKR-VKLGLAMMITFAIAPSLPANDVPVFSFFALWLAV--Q 76 # # Query: 75 ELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVL 134 # ++LIG+ +GF F A+ AG +I G + +T +P + + + + +L # Sbjct: 77 QILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLL 136 # # Query: 135 FLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMV 194 # FL G +++ L ++ +LPIG G ++ L L ++F L ALP + +++ # Sbjct: 137 FLTFNGHLWLISLLVDTFHTLPIG-GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLL 195 # # Query: 195 LADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +L+LGL+NR A QL++F + P+ + + L+ +P # Sbjct: 196 TLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMP 234 # # # >ZfliR # Length = 261 # # Score = 41.6 bits (96), Expect = 0.002 # Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 4/219 (1%) # # Query: 15 MMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCT 74 # ++R ++ P+ + RS+ ++ GL + I + P + + S W+ V # Sbjct: 20 LLRVLALISTAPILSERSVPKR-VKLGLAMMITFAIAPSLPANDVPVFSFFALWLAV--Q 76 # # Query: 75 ELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVL 134 # ++LIG+ +GF F A+ AG +I G + +T +P + + + + +L # Sbjct: 77 QILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLL 136 # # Query: 135 FLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMV 194 # FL G +++ L ++ +LPIG G ++ L L ++F L ALP + +++ # Sbjct: 137 FLTFNGHLWLISLLVDTFHTLPIG-GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLL 195 # # Query: 195 LADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # +L+LGL+NR A QL++F + P+ + + L+ +P # Sbjct: 196 TLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMP 234 # # # >jhp0159 # Length = 255 # # Score = 40.8 bits (94), Expect = 0.003 # Identities = 47/227 (20%), Positives = 103/227 (44%), Gaps = 8/227 (3%) # # Query: 6 PGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNS-- 63 # P + L +R G+L P F + L+ + A++L V+ +F +N+ # Sbjct: 11 PHVRDFFLLFLRVSGVLSFFPFFE-----NHLVPLSVRGALSLYVSAIFYPTLEFSNAIY 65 # # Query: 64 SPVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLF 123 # +P +I EL +GV + F ++ A I G TM++ ++P G + + # Sbjct: 66 TPEGFIIACLCELFLGVCASVFLQIVFASLVFATDSISFSMGLTMASAYDPISGSQKPIV 125 # # Query: 124 GVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCL 183 # G + ++ L +Q++ + S ++P+G+ + +L + + +F + # Sbjct: 126 GQALLLLAILILLDLSFHHQIILFVDHSLKAVPLGRFVF-EPELAKNIVKAFSHLFVIGF 184 # # Query: 184 CFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # A P L +++L+D+ G+I ++ Q N+ + P+K A+ +++ # Sbjct: 185 SMAFPILCLVLLSDIIFGMIMKTHPQFNLLAIGFPVKIAIGFVGIIL 231 # # # >CC1076 # Length = 251 # # Score = 40.0 bits (92), Expect = 0.005 # Identities = 37/150 (24%), Positives = 69/150 (45%), Gaps = 1/150 (0%) # # Query: 70 GVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQ 129 # G + E+LIG+++G V L ++ AG +I + + NP M S+ + # Sbjct: 71 GAVIHEVLIGLMIGSVLRLFMTSLTTAGEIISMQTTLSFAQSTNPSMEGSSTAVATFLSM 130 # # Query: 130 ILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMFELCLCFALPA 189 # + L + + + +AA+ SY P + + L +QT Q F L + A P # Sbjct: 131 LGLTLVMATDLHHLFIAAIVKSYTIFPFTRAVPVNDAAALAVQTVAQ-SFSLGVQLAAPV 189 # # Query: 190 LLVMVLADLSLGLINRSARQLNVFFLAMPI 219 # ++ ++ +L+ GL+ R +FF+A P+ # Sbjct: 190 IVFSLVFNLATGLVGRIMPAFQIFFVASPL 219 # # # >TM0910 # Length = 258 # # Score = 38.9 bits (89), Expect = 0.011 # Identities = 51/215 (23%), Positives = 91/215 (41%), Gaps = 6/215 (2%) # # Query: 20 GILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIG 79 # G LI P F+ R+ ++ L+ + + I N+ +++ L L+G # Sbjct: 26 GFFLIAPFFSERAF--PVVVRVLLGLFTSWLMLFTVDVSIPLNTPVLSFTLNLFFNFLVG 83 # # Query: 80 VVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISG 139 # +GF+ L A N AG++ G M + G + +++ LTV LI G # Sbjct: 84 FGIGFIVYLFLQAFNGAGYIFGFQIGFGMEEVLAFGEEETNPTGELVYFIALTVFVLIKG 143 # # Query: 140 GFNQVLAALYGSYDSLPIG-QGIQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADL 198 # + L S D P+ G+ ++ F L L P + M++ + # Sbjct: 144 PV-LLFEGLKDSIDVFPVNLTGVTDG--FFSYIVGRSSDFFVLILKIGAPVIAFMLIISI 200 # # Query: 199 SLGLINRSARQLNVFFLAMPIKSALALFLLLISLP 233 # LG+++R Q+NVF + +P+K + + L+L LP # Sbjct: 201 VLGIVSRLIPQMNVFMVGLPLKVIIGVILILGMLP 235 # # # >ECs3722 # Length = 78 # # Score = 35.0 bits (79), Expect = 0.18 # Identities = 20/48 (41%), Positives = 32/48 (66%) # # Query: 183 LCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # + +A P + VM+ + LGL+ R A QLN F +++ +KSALA +L+I # Sbjct: 5 IVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILII 52 # # # >Z4186 # Length = 78 # # Score = 35.0 bits (79), Expect = 0.18 # Identities = 20/48 (41%), Positives = 32/48 (66%) # # Query: 183 LCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLI 230 # + +A P + VM+ + LGL+ R A QLN F +++ +KSALA +L+I # Sbjct: 5 IVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILII 52 # # # >mlr2958 # Length = 250 # # Score = 32.7 bits (73), Expect = 0.91 # Identities = 40/173 (23%), Positives = 78/173 (44%), Gaps = 11/173 (6%) # # Query: 65 PVTWIGVLCTELLIGVVMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVE----- 119 # P + ++ +ELLIG ++G + L A+ G I L G S G +E # Sbjct: 66 PQILVPMIISELLIGGLIGAMTRLYMEALRFMGSAIAMLIGYGGSG----GPAIEEPEPQ 121 # # Query: 120 SSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQGIQPAADLLLFLQTEWQMMF 179 # ++L ++ L +LF+ ++++ AL SY P+ P A L+ T F # Sbjct: 122 AALAAIISFSALLMLFVFDFD-HEIVRALVASYTVAPVNVFFNPQAALVDITDTVSDTFF 180 # # Query: 180 ELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISL 232 # L + P + +L +L++G +N+ Q+ ++F++ P A + + ++ # Sbjct: 181 -LVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAI 232 # # Database: myva Posted date: Sep 16, 2002 2:25 PM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.329 0.144 0.429 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,229,538 Number of Sequences: 192987 Number of extensions: 1201261 Number of successful extensions: 5212 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 77 Number of HSP's that attempted gapping in prelim test: 5101 Number of HSP's gapped (non-prelim): 146 length of query: 264 length of database: 59,019,183 effective HSP length: 108 effective length of query: 156 effective length of database: 38,176,587 effective search space: 5955547572 effective search space used: 5955547572 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 64 (29.3 bits) S2: 64 (29.3 bits)
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