| wiew.cgi?COG2165 | 88 proteins | NU | COG2165 | Type II secretory pathway, pseudopilin PulG | Help |
|---|---|---|---|---|---|
| 9 from | query genome Vibrio cholerae (Vibrionales | Gammaproteobacteria) | ||||
| 1 BUDs | VC0408 ( VC0409 VC0502 ) VC0410 VC0411 VC0828 VC2728 VC2729 VC2730 | ||||
174 letters (r) 0 0 865 = ||| 1 VC0502 (174) = 3 1 140 = ||| 2 VC0409 (178) = 0 -23
105 _ | 14 NMA0424 (149) COG4968 2 -23 102 = || 19 PA2675 (144) = 0 -25 100 _ || 31 STM0144 (145) COG4969 0 -23 100 _ | 24 NMB2016 (149) COG4968 1 -5 100 _ | 56 NMA0264 (170) COG4969 1 -5 100 _ | 50 NMB0018 (170) COG4969 12 -39 99 _ ||| 24 VC0857 (147) COG4968 12 1 97 _ ||| 6 VC0858 (184) COG4970 12 -37 95 = || 34 PA0681 (149) = 21 -39 93 = | 34 mll6827 (156) = 15 -17 93 = | 27 RSp0142 (172) = 1 -9 92 = ||| 2 VC0410 (162) = 47 -11 92 = 39 all0563 (207) = 8 -14 90 _ | 35 RSc0558 (168) COG4969 0 -24 89 _ || 42 ppdD (146) COG4969 0 -24 89 _ || 43 ECs0112 (146) COG4969 0 -24 89 _ || 43 ZppdD (146) COG4969 3 -31 89 = ||| 45 VC2730 (146) = 2 -31 89 = || 40 YPO0813 (145) = 3 -16 87 _ || 25 PA4550 (168) COG4970 4 -18 86 _ | 40 NMA1110 (162) COG4969 16 -34 86 = | 50 RSc3106 (156) = 4 -16 85 _ | 41 NMB0890 (162) COG4969 19 -26 84 _ ||| 55 VC2423 (167) COG4969 3 7 83 _ | 31 RSp1292 (181) COG4970 8 -34 82 = || 55 PA3101 (148) = 157 -15 82 = 42 DR0548 (314) = 9 23 82 _ | 39 RSc0722 (203) COG4970 15 -21 82 = 56 sll1694 (168) = 17 -24 80 = 52 sll1695 (170) = 5 -49 80 = | 52 RSc2301 (130) = 9 -39 80 = | 48 RSp0468 (144) = 2 45 79 _ | 42 NMA1106 (221) COG4970 1 -37 79 _ | 46 NMB0547 (129) COG4968 9 -41 78 _ | 54 RSc2680 (146) COG4968 1 -46 78 _ | 50 NMA0726 (129) COG4968 2 46 78 _ | 44 NMB0886 (222) COG4970 20 -39 78 = | 50 RSc2310 (155) = 0 -57 78 = 53 CAC2103 (120) = 10 -41 77 = | 57 RSp0150 (144) = 8 -24 77 _ | 61 RSc0723 (161) COG4968 9 -9 76 _ | 58 RSc0557 (173) COG4969 7 4 76 _ || 49 XF0487 (185) COG4969 5 -50 76 = | 50 RSp0141 (129) = 0 -3 76 = || 18 hofH (169) = 1 -37 76 _ || 53 PA4556 (141) COG4968 100 -95 76 _ | 5 mlr3174 (180) COG3556 8 8 76 _ || 37 XF0028 (187) COG4970 -2 -1 75 = | 31 Cj1343c (171) = 2 -18 75 = | 14 RSp0471 (158) = 6 -46 75 _ || 57 YPO3425 (154) COG4969 31 25 75 = 37 all1769 (231) = 13 21 75 = ||| 3 VC0408 (196) = 10 -24 75 _ | 28 mlr6822 (157) COG4970 20 -12 74 = 26 slr1929 (183) = 11 -35 74 = | 36 CC0176 (150) = 0 -56 73 _ 30 aq_1433 (119) COG4969 66 4 73 _ | 18 SMc00085 (242) COG3346 5 61 71 _ | 18 RSc3109 (240) COG4795 4 -69 71 _ 58 BH2827 (102) COG4537 5 -51 70 = | 70 RSp0470 (128) = 12 -29 70 = 6 slr2016 (158) = 14 -16 70 = | 36 RSc2302 (172) = 6 -20 70 _ | 22 RSc2679 (157) COG4970 0 -69 68 = 18 BH2825 (108) = 57 32 67 _ 83 MK1129 (265) COG0693 0 -17 67 = 65 TM1271 (157) = 9 2 66 = 25 DR1233 (186) = 25 150 66 _ 255 SA0846 (356) COG1173 0 -31 66 _ | 32 RSc0717 (143) COG4968 0 1 66 = || 61 PA3100 (172) = 0 63 66 _ || 49 PA3098 (237) COG4795 -2 84 65 ||| 16 VC0412 (256) -2 143 65 _ 255 SPBC25B2.04c (328) COG1161 10 29 65 _ ||255 PA0677 (213) COG4795 14 -3 63 = 68 all1765 (185) = 2 -23 63 = || 57 PA0678 (149) = 580 128 63 255 CAC0561 (878) 9 -68 63 _ 65 SPy0103 (108) COG4537 1 20 62 _ || 40 gspJ (195) COG4795 17 83 62 _ 255 sll1508 (276) COG0774 1 13 62 _ ||255 ppdB (187) COG4795 1 12 62 _ || 81 XF0539 (187) COG4969 1 13 62 _ ||255 ECs3682 (187) COG4795 1 13 62 _ ||255 ZppdB (187) COG4795 -42 -14 61 _ || 53 ECs3333 (118) COG1393 BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= VC0502 (174 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value VC0502 337 6e-93 VC0409 59 7e-09 NMA0424 45 7e-05 PA2675 44 2e-04 STM0144 43 3e-04 NMB2016 43 3e-04 NMA0264 43 3e-04 NMB0018 43 3e-04 VC0857 43 4e-04 VC0858 42 7e-04 PA0681 41 0.001 mll6827 40 0.002 RSp0142 40 0.002 VC0410 40 0.002 all0563 40 0.003 RSc0558 39 0.004 ppdD 39 0.005 ECs0112 39 0.005 ZppdD 39 0.005 VC2730 39 0.005 YPO0813 39 0.006 PA4550 38 0.009 NMA1110 38 0.013 RSc3106 38 0.014 NMB0890 37 0.015 VC2423 37 0.019 RSp1292 37 0.026 PA3101 36 0.036 DR0548 36 0.037 RSc0722 36 0.037 sll1694 36 0.040 sll1695 35 0.061 RSc2301 35 0.063 RSp0468 35 0.065 NMA1106 35 0.076 NMB0547 35 0.078 RSc2680 35 0.100 NMA0726 35 0.10 NMB0886 35 0.10 RSc2310 35 0.12 CAC2103 35 0.12 RSp0150 34 0.13 RSc0723 34 0.14 RSc0557 34 0.16 XF0487 34 0.16 RSp0141 34 0.18 hofH 34 0.18 PA4556 34 0.20 mlr3174 34 0.20 XF0028 34 0.20 Cj1343c 33 0.21 RSp0471 33 0.22 YPO3425 33 0.22 all1769 33 0.24 VC0408 33 0.24 mlr6822 33 0.25 slr1929 33 0.31 CC0176 33 0.34 aq_1433 33 0.42 SMc00085 33 0.45 RSc3109 32 0.60 BH2827 32 0.77 RSp0470 32 0.84 slr2016 32 0.85 RSc2302 32 0.90 RSc2679 32 0.92 BH2825 31 1.6 MK1129 30 1.8 TM1271 30 1.8 DR1233 30 2.3 SA0846 30 2.3 RSc0717 30 2.5 PA3100 30 2.6 PA3098 30 2.8 VC0412 30 3.1 SPBC25B2.04c 30 3.7 PA0677 30 3.7 all1765 29 5.2 PA0678 29 5.6 CAC0561 29 5.9 SPy0103 29 5.9 gspJ 28 6.6 sll1508 28 6.9 ppdB 28 6.9 XF0539 28 7.4 ECs3682 28 7.5 ZppdB 28 7.5 ECs3333 28 8.8
# >VC0502 # Length = 174 # # Score = 337 bits (865), Expect = 6e-93 # Identities = 174/174 (100%), Positives = 174/174 (100%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA # Sbjct: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # # Query: 61 LIEGQDIGKGEITINGVKTPLLNGYPSVNGKDSFEEINAQVQAWFNIDSVGKNVIEIDSS 120 # LIEGQDIGKGEITINGVKTPLLNGYPSVNGKDSFEEINAQVQAWFNIDSVGKNVIEIDSS # Sbjct: 61 LIEGQDIGKGEITINGVKTPLLNGYPSVNGKDSFEEINAQVQAWFNIDSVGKNVIEIDSS 120 # # Query: 121 AAPFFIDKASSRNQIYIFFSDAPTTGDRTEYGCQVRYQNPESEGPSVRVLTDDC 174 # AAPFFIDKASSRNQIYIFFSDAPTTGDRTEYGCQVRYQNPESEGPSVRVLTDDC # Sbjct: 121 AAPFFIDKASSRNQIYIFFSDAPTTGDRTEYGCQVRYQNPESEGPSVRVLTDDC 174 # # # >VC0409 # Length = 178 # # Score = 58.5 bits (140), Expect = 7e-09 # Identities = 27/64 (42%), Positives = 44/64 (68%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M + GFTLIEL++ IVILG++AV AAPRF+N+ DA+ ++ + + A+ + + +A # Sbjct: 4 MKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRA 63 # # Query: 61 LIEG 64 # I+G # Sbjct: 64 AIKG 67 # # # >NMA0424 # Length = 149 # # Score = 45.1 bits (105), Expect = 7e-05 # Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESA 52 # M+ N+GFTL+ELI ++IL V+A+I P + N + AK NT+ AA +E+A # Sbjct: 1 MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINTVR--AALLENA 50 # # # >PA2675 # Length = 144 # # Score = 43.9 bits (102), Expect = 2e-04 # Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 9/83 (10%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEG 64 # QGFTL+E+I+ +VI+G++ + PR N + AKA T ++ + +L L # Sbjct: 7 QGFTLLEMIVVLVIIGMLMGLVGPRLFNQADKAKAQT-------ADTQVKMLKGALLTMR 59 # # Query: 65 QDIGKGEITINGVKTPLLNGYPS 87 # DIG+ G+ LLN PS # Sbjct: 60 LDIGRLPTEEEGLA--LLNTPPS 80 # # # >STM0144 # Length = 145 # # Score = 43.1 bits (100), Expect = 3e-04 # Identities = 25/87 (28%), Positives = 43/87 (48%), Gaps = 4/87 (4%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M K +GFTLIEL++ I I+ +++ I P + N + A ML +A+ L # Sbjct: 1 MEKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVEL----C 56 # # Query: 61 LIEGQDIGKGEITINGVKTPLLNGYPS 87 # +E + +NG+ +P++ Y S # Sbjct: 57 ALEHGGTSTCDAGVNGIPSPVITRYVS 83 # # # >NMB2016 # Length = 149 # # Score = 43.1 bits (100), Expect = 3e-04 # Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESA 52 # M+ N+GFTL+ELI ++IL V+A+I P + N + AK N + AA +E+A # Sbjct: 1 MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVR--AALLENA 50 # # # >NMA0264 # Length = 170 # # Score = 43.1 bits (100), Expect = 3e-04 # Identities = 20/50 (40%), Positives = 35/50 (70%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALT 54 # +GFTLIEL+I I I+G++A +A P + + + A+ + + +A G +SA+T # Sbjct: 6 KGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVT 55 # # # >NMB0018 # Length = 170 # # Score = 43.1 bits (100), Expect = 3e-04 # Identities = 20/50 (40%), Positives = 35/50 (70%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALT 54 # +GFTLIEL+I I I+G++A +A P + + + A+ + + +A G +SA+T # Sbjct: 6 KGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVT 55 # # # >VC0857 # Length = 147 # # Score = 42.7 bits (99), Expect = 4e-04 # Identities = 20/36 (55%), Positives = 28/36 (77%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKD 36 # +S+ QG TLIEL+IA+VI+GV+A IA P + N K+ # Sbjct: 13 VSQQQGMTLIELMIAVVIVGVLASIAYPAYTNYVKE 48 # # # >VC0858 # Length = 184 # # Score = 42.0 bits (97), Expect = 7e-04 # Identities = 21/64 (32%), Positives = 38/64 (58%), Gaps = 3/64 (4%) # # Query: 4 NQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIE 63 # ++GFTL+EL+I + +L + + AAP F +S+ K M ++A ++ L S+A+ # Sbjct: 16 HRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTK---MTNLANELQGFLIQAKSEAVFR 72 # # Query: 64 GQDI 67 # QD+ # Sbjct: 73 NQDL 76 # # # >PA0681 # Length = 149 # # Score = 41.2 bits (95), Expect = 0.001 # Identities = 18/51 (35%), Positives = 32/51 (62%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # +GFTLIE+++ +VILG++A + P+ ++ A+A +G+ AL L # Sbjct: 17 RGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKL 67 # # # >mll6827 # Length = 156 # # Score = 40.4 bits (93), Expect = 0.002 # Identities = 19/52 (36%), Positives = 32/52 (61%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLH 57 # GFTL+EL++ + I+ +IA +AAP+ + A+ N + +ESAL L + # Sbjct: 27 GFTLVELLVVLAIIALIATLAAPQVLRYLGAARTNAAKAQIRNIESALELYY 78 # # # >RSp0142 # Length = 172 # # Score = 40.4 bits (93), Expect = 0.002 # Identities = 16/26 (61%), Positives = 23/26 (87%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAP 28 # ++QGFTLIEL++ + ILGV+A+IA P # Sbjct: 18 RHQGFTLIELLVTLAILGVLALIAVP 43 # # # >VC0410 # Length = 162 # # Score = 40.0 bits (92), Expect = 0.002 # Identities = 22/57 (38%), Positives = 35/57 (60%), Gaps = 4/57 (7%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61 # +GFTLIEL++ I++LG+++ AA RF+ S A T + A +L L S+A+ # Sbjct: 6 KGFTLIELVVVIILLGILSAYAASRFLGPSSFAVVTTQSEILA----SLRLTQSRAM 58 # # # >all0563 # Length = 207 # # Score = 40.0 bits (92), Expect = 0.003 # Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 9/84 (10%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRF---INISKDAKANTMLSVAAGMESALTLLHSQ 59 # + +GFTLIEL++ ++I+GV+A IA P +N +K ++A + A + A L + + # Sbjct: 50 EEEGFTLIELLVVVIIIGVLAAIALPSLLGQVNKAKQSEARNYVGTANRSQQAFFLEYQR 109 # # Query: 60 ALIEGQDIGKGEITINGVKTPLLN 83 # D+ + ++ G++TP N # Sbjct: 110 F---ATDLSELQV---GIRTPSEN 127 # # # >RSc0558 # Length = 168 # # Score = 39.3 bits (90), Expect = 0.004 # Identities = 19/43 (44%), Positives = 30/43 (69%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAA 47 # +GFTLIEL+I + I+G++A IA P + + + A+ LS+AA # Sbjct: 13 KGFTLIELMIVVAIVGILAAIAIPAYQDYTVRARVTEGLSLAA 55 # # # >ppdD # Length = 146 # # Score = 38.9 bits (89), Expect = 0.005 # Identities = 25/87 (28%), Positives = 41/87 (46%), Gaps = 4/87 (4%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M K +GFTLIEL++ I I+ +++ I P + N + A ML +A+ L # Sbjct: 1 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVEL----C 56 # # Query: 61 LIEGQDIGKGEITINGVKTPLLNGYPS 87 # +E + + NG+ +P Y S # Sbjct: 57 ALEHGGLDTCDGGSNGIPSPTTTRYVS 83 # # # >ECs0112 # Length = 146 # # Score = 38.9 bits (89), Expect = 0.005 # Identities = 25/87 (28%), Positives = 41/87 (46%), Gaps = 4/87 (4%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M K +GFTLIEL++ I I+ +++ I P + N + A ML +A+ L # Sbjct: 1 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVEL----C 56 # # Query: 61 LIEGQDIGKGEITINGVKTPLLNGYPS 87 # +E + + NG+ +P Y S # Sbjct: 57 ALEHGGLDTCDGGSNGIPSPTTTRYVS 83 # # # >ZppdD # Length = 146 # # Score = 38.9 bits (89), Expect = 0.005 # Identities = 25/87 (28%), Positives = 41/87 (46%), Gaps = 4/87 (4%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M K +GFTLIEL++ I I+ +++ I P + N + A ML +A+ L # Sbjct: 1 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVEL----C 56 # # Query: 61 LIEGQDIGKGEITINGVKTPLLNGYPS 87 # +E + + NG+ +P Y S # Sbjct: 57 ALEHGGLDTCDGGSNGIPSPTTTRYVS 83 # # # >VC2730 # Length = 146 # # Score = 38.9 bits (89), Expect = 0.005 # Identities = 17/55 (30%), Positives = 31/55 (55%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # M K GFTL+E+++ +VILG++A P + + A ++ +E+AL + # Sbjct: 4 MRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDM 58 # # # >YPO0813 # Length = 145 # # Score = 38.9 bits (89), Expect = 0.006 # Identities = 18/53 (33%), Positives = 33/53 (61%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # K +GFTL+E+++ IVILG++A + P ++ A +S + +E+AL + # Sbjct: 5 KTKGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDM 57 # # # >PA4550 # Length = 168 # # Score = 38.1 bits (87), Expect = 0.009 # Identities = 25/79 (31%), Positives = 42/79 (52%), Gaps = 13/79 (16%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61 # S + GFTLIEL+I +V+L ++A A P F ++ + N + S A + + L S+A+ # Sbjct: 5 SNSTGFTLIELLIIVVLLAIMASFAIPNFKQLT---ERNELQSAAEELNAMLQYARSEAV 61 # # Query: 62 ----------IEGQDIGKG 70 # ++ +D GKG # Sbjct: 62 SQRRAISIQALKDKDWGKG 80 # # # >NMA1110 # Length = 162 # # Score = 37.7 bits (86), Expect = 0.013 # Identities = 24/78 (30%), Positives = 44/78 (55%), Gaps = 2/78 (2%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMES-ALTLLHSQAL 61 # + +GFTLIE++I + ILG+I+VIA P + + + + + + G+ + + + L # Sbjct: 7 EQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPL 66 # # Query: 62 IEGQDI-GKGEITINGVK 78 # + Q I K EI ++G K # Sbjct: 67 DDNQTIKSKLEIFVSGYK 84 # # # >RSc3106 # Length = 156 # # Score = 37.7 bits (86), Expect = 0.014 # Identities = 17/51 (33%), Positives = 31/51 (60%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # +GFTLIE+++ +VILG++A + P+ ++ +A+ A + AL L # Sbjct: 21 RGFTLIEIMVVVVILGILAALVVPKIMSRPDEARIIAAKQDIASISQALKL 71 # # # >NMB0890 # Length = 162 # # Score = 37.4 bits (85), Expect = 0.015 # Identities = 15/28 (53%), Positives = 23/28 (81%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRF 30 # + +GFTLIE++I + ILG+I+VIA P + # Sbjct: 7 EQKGFTLIEMMIVVAILGIISVIAIPSY 34 # # # >VC2423 # Length = 167 # # Score = 37.0 bits (84), Expect = 0.019 # Identities = 16/33 (48%), Positives = 25/33 (75%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISK 35 # + +GFTLIEL+I + ++GV+A IA P++ N K # Sbjct: 22 QQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVK 54 # # # >RSp1292 # Length = 181 # # Score = 36.6 bits (83), Expect = 0.026 # Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 3/63 (4%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEG 64 # +GFTL+E++I I I+ ++ + AAP F + + A+ T ++ + + L S+A+ G # Sbjct: 8 RGFTLVEMVIVISIVAILVMFAAPSFQSTIQSARTTTEVN---SLVNDLQFARSEAIKRG 64 # # Query: 65 QDI 67 # Q + # Sbjct: 65 QPV 67 # # # >PA3101 # Length = 148 # # Score = 36.2 bits (82), Expect = 0.036 # Identities = 16/53 (30%), Positives = 30/53 (56%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # + GFTLIE+++ +VILG++A + P+ ++ AK + +AL + # Sbjct: 11 QQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDM 63 # # # >DR0548 # Length = 314 # # Score = 36.2 bits (82), Expect = 0.037 # Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKAN 40 # QGFTLIEL+I I I+G++A + P + AKAN # Sbjct: 162 QGFTLIELLIVIAIIGILAAVLIPNLLGAR--AKAN 195 # # # >RSc0722 # Length = 203 # # Score = 36.2 bits (82), Expect = 0.037 # Identities = 19/59 (32%), Positives = 36/59 (60%), Gaps = 3/59 (5%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIE 63 # +GFTL+EL++ I I+ ++ V+ AP F + + + +LS A + SA+ ++AL + # Sbjct: 14 RGFTLLELMVTIAIISIMLVLVAPSFSDFLRKQR---LLSAADSVASAIGQARTRALAQ 69 # # # >sll1694 # Length = 168 # # Score = 36.2 bits (82), Expect = 0.040 # Identities = 17/47 (36%), Positives = 27/47 (57%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESA 52 # GFTLIEL++ ++I+GV+A IA P + A+ + S + A # Sbjct: 21 GFTLIELLVVVIIIGVLAAIALPNLLGQVGKARESEAKSTIGALNRA 67 # # # >sll1695 # Length = 170 # # Score = 35.4 bits (80), Expect = 0.061 # Identities = 16/46 (34%), Positives = 31/46 (66%), Gaps = 3/46 (6%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRF---INISKDAKANTMLS 44 # ++ +GFTL+EL++ ++ILGV+ + P I +++A+A +LS # Sbjct: 19 TRQRGFTLLELLVVVIILGVLGAMTLPNLFSQIGKAREAEAKQILS 64 # # # >RSc2301 # Length = 130 # # Score = 35.4 bits (80), Expect = 0.063 # Identities = 13/38 (34%), Positives = 27/38 (70%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKA 39 # ++ +GFTLIEL++ + I+G++ +A PR+ + + +A # Sbjct: 7 ARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRA 44 # # # >RSp0468 # Length = 144 # # Score = 35.4 bits (80), Expect = 0.065 # Identities = 12/30 (40%), Positives = 22/30 (73%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRF 30 # M + +GFTL+EL++ + I+G++A PR+ # Sbjct: 10 MQEARGFTLLELLVVVAIIGLLAAYVGPRY 39 # # # >NMA1106 # Length = 221 # # Score = 35.0 bits (79), Expect = 0.076 # Identities = 16/26 (61%), Positives = 20/26 (76%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAP 28 # K QGFTL EL+I +VI V+A+IA P # Sbjct: 5 KQQGFTLTELLIVMVIAAVMAMIALP 30 # # # >NMB0547 # Length = 129 # # Score = 35.0 bits (79), Expect = 0.078 # Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 9/59 (15%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIE 63 # +GFTL+EL+IA+ ILG++ +I P + + + + E TLLH+ +E # Sbjct: 6 KGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLS---------EVRTTLLHNAQTME 55 # # # >RSc2680 # Length = 146 # # Score = 34.7 bits (78), Expect = 0.100 # Identities = 20/53 (37%), Positives = 31/53 (57%), Gaps = 4/53 (7%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINI----SKDAKANTMLSVAAGMESAL 53 # +GFTLIEL+I I+ ++AV+A P ++ ++ A + M VAA E L # Sbjct: 14 RGFTLIELMIVAAIVAILAVLAYPSYVQYVVRSNRAAAESFMQEVAAAQERFL 66 # # # >NMA0726 # Length = 129 # # Score = 34.7 bits (78), Expect = 0.10 # Identities = 13/26 (50%), Positives = 21/26 (80%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRF 30 # +GFTL+EL+IA+ ILG++ +I P + # Sbjct: 6 KGFTLLELMIAVAILGILTLITYPSY 31 # # # >NMB0886 # Length = 222 # # Score = 34.7 bits (78), Expect = 0.10 # Identities = 15/26 (57%), Positives = 20/26 (76%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAP 28 # K QGFTL EL+I +VI ++A+IA P # Sbjct: 5 KQQGFTLTELLIVMVIAAIMAMIALP 30 # # # >RSc2310 # Length = 155 # # Score = 34.7 bits (78), Expect = 0.12 # Identities = 12/27 (44%), Positives = 23/27 (84%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFIN 32 # GFTL+EL++ +VI+G++A + AP++ + # Sbjct: 26 GFTLLELLVVMVIIGLLAGLVAPQYFD 52 # # # >CAC2103 # Length = 120 # # Score = 34.7 bits (78), Expect = 0.12 # Identities = 18/48 (37%), Positives = 29/48 (59%), Gaps = 3/48 (6%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPR---FINISKDAKANTMLSV 45 # M K +GFTLIELII++ I+ ++ I P +I + + KA M ++ # Sbjct: 1 MMKKRGFTLIELIISMSIIAILGAILVPNIYSYIRRANNEKAKDMAAL 48 # # # >RSp0150 # Length = 144 # # Score = 34.3 bits (77), Expect = 0.13 # Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPR-FINISKDAKANTMLSVAA 47 # +GFTL+EL++ + I+G++A PR F I K T + A # Sbjct: 15 RGFTLLELLVVVAIIGLLAAYVGPRYFAQIGKSEVTTTKAQIEA 58 # # # >RSc0723 # Length = 161 # # Score = 34.3 bits (77), Expect = 0.14 # Identities = 15/42 (35%), Positives = 28/42 (65%), Gaps = 3/42 (7%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAP---RFINISKDAKANTML 43 # +GFTLIEL+I ++++ +++ IA P +F+ S+ +A L # Sbjct: 13 RGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAAL 54 # # # >RSc0557 # Length = 173 # # Score = 33.9 bits (76), Expect = 0.16 # Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTL 55 # +GFTLIEL+I + I+G++A +A P + + + ++ L++ AG AL + # Sbjct: 14 RGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLAL-AGQAKALVV 63 # # # >XF0487 # Length = 185 # # Score = 33.9 bits (76), Expect = 0.16 # Identities = 15/28 (53%), Positives = 19/28 (67%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAP 28 # M K QGF +IEL+I IVI+ V+ I P # Sbjct: 8 MKKQQGFNVIELMILIVIIAVLTAITLP 35 # # # >RSp0141 # Length = 129 # # Score = 33.9 bits (76), Expect = 0.18 # Identities = 14/42 (33%), Positives = 25/42 (59%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTML 43 # ++ FTLIEL++ + I+ V+ IA PR+ + AK ++ # Sbjct: 7 NETSAFTLIELLVVLAIVAVLLTIAVPRYFSSVDRAKETVLV 48 # # # >hofH # Length = 169 # # Score = 33.9 bits (76), Expect = 0.18 # Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M++ +GFTL+E+++ + ++ + A + F +D + AA +AL L +A # Sbjct: 1 MNQQRGFTLLEMMLVLALVAITASVVL--FTYGREDVASTRARETAARFTAALELAIDRA 58 # # Query: 61 LIEGQDIG 68 # + GQ +G # Sbjct: 59 TLSGQPVG 66 # # # >PA4556 # Length = 141 # # Score = 33.9 bits (76), Expect = 0.20 # Identities = 15/52 (28%), Positives = 31/52 (58%), Gaps = 3/52 (5%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINI---SKDAKANTMLSVAAGME 50 # ++ +GFTL+E+++ + ++G++ IA P + N S + +LS AA + # Sbjct: 3 TRQKGFTLLEMVVVVAVIGILLGIAIPSYQNYVIRSNRTEGQALLSDAAARQ 54 # # # >mlr3174 # Length = 180 # # Score = 33.9 bits (76), Expect = 0.20 # Identities = 18/49 (36%), Positives = 31/49 (62%), Gaps = 1/49 (2%) # # Query: 15 AIVILGVIAVIAAPRFINISKDAKANTMLSVAAG-MESALTLLHSQALI 62 # A I+G++++I RFI+ ++ A AN SV AG + S T + ++AL+ # Sbjct: 115 AFGIVGLLSIIPTVRFISWNRQAGANPSFSVPAGELASVKTYIRAEALV 163 # # # >XF0028 # Length = 187 # # Score = 33.9 bits (76), Expect = 0.20 # Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEGQ 65 # GF+ +EL++ I IL ++A +A P F+N+ + + S A + ++L L ++A+ G # Sbjct: 14 GFSTVELMVTIAILAILAGLAYPSFMNLINGER---LTSSANELVASLQLARTEAIRLGS 70 # # Query: 66 DI 67 # + # Sbjct: 71 PV 72 # # # >Cj1343c # Length = 171 # # Score = 33.5 bits (75), Expect = 0.21 # Identities = 15/40 (37%), Positives = 27/40 (67%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLS 44 # + FT++EL+ IVILG++A IA P+ + +A+ + L+ # Sbjct: 3 KAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLN 42 # # # >RSp0471 # Length = 158 # # Score = 33.5 bits (75), Expect = 0.22 # Identities = 28/94 (29%), Positives = 48/94 (50%), Gaps = 6/94 (6%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61 # +K G++LIEL + + +L +AV+AAP ++K AK + + + AL + +A+ # Sbjct: 4 AKCAGYSLIELGVVLAVLATLAVLAAPVAQLMTKRAKEHQLRVGLERIRDALD-AYKRAV 62 # # Query: 62 IEGQDIGKGEITINGVK---TPLLNGYPSVNGKD 92 # G+ G T++G L+NG PS D # Sbjct: 63 DTGEIQSPG--TLSGYPPTLATLVNGAPSARDPD 94 # # # >YPO3425 # Length = 154 # # Score = 33.5 bits (75), Expect = 0.22 # Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 20/99 (20%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLH--- 57 # ++ +GFTLIEL++A+ I+ V++ I P + + A ML + A+ L # Sbjct: 7 LTLQKGFTLIELMVAVAIIAVLSGIGIPSYQRYIQKAALTDMLQAIVPYKMAVELCALEQ 66 # # Query: 58 ---------SQALIEGQ--------DIGKGEITINGVKT 79 # S + GQ +I KG IT++G T # Sbjct: 67 SNLDSCNAGSNGIPAGQVSRYINAINIAKGVITLSGQHT 105 # # # >all1769 # Length = 231 # # Score = 33.5 bits (75), Expect = 0.24 # Identities = 19/52 (36%), Positives = 33/52 (62%), Gaps = 5/52 (9%) # # Query: 4 NQGFTLIELIIAIVILGVIAVIAAP---RFINISKDAKANTMLSVAAGMESA 52 # + GF+L+ELI ++++G++A IA P F+N + KAN +V A ++ A # Sbjct: 35 DSGFSLVELIAVVMMVGILAAIALPGWSAFVNRQRVNKAND--AVLASIQEA 84 # # # >VC0408 # Length = 196 # # Score = 33.5 bits (75), Expect = 0.24 # Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 12/85 (14%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEG 64 # QGF+L+EL+I IV++G++AV A PRF++++ +AK ++ VA G A +L ++A E # Sbjct: 18 QGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGF--ATGVLSARAQWEA 75 # # Query: 65 QDIGKGEITINGVKTPLLNGYPSVN 89 # Q T N YPS+N # Sbjct: 76 Q----------ARPTLTANNYPSIN 90 # # # >mlr6822 # Length = 157 # # Score = 33.5 bits (75), Expect = 0.25 # Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 3/56 (5%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61 # GFTL+E+++ + I+ ++A IAAP ++ + ++ +VA + L L + A+ # Sbjct: 16 GFTLVEMLVVLAIMALVAAIAAPGLVS---HYRTKSLETVAGEITMRLRLSRTSAI 68 # # # >slr1929 # Length = 183 # # Score = 33.1 bits (74), Expect = 0.31 # Identities = 17/52 (32%), Positives = 33/52 (62%), Gaps = 1/52 (1%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINI-SKDAKANTMLSVAAGMESA 52 # + +QG+TLIE+ + VI+G++A +A P I +++ + M+ V A ++ A # Sbjct: 22 TSSQGWTLIEIGVVTVIVGILAAMAFPSLAGIQARNQVRSRMIEVRAAVQEA 73 # # # >CC0176 # Length = 150 # # Score = 33.1 bits (74), Expect = 0.34 # Identities = 16/52 (30%), Positives = 30/52 (56%) # # Query: 2 SKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESAL 53 # ++ GFTL+E+++ IVILG++A + A + + A + + +E AL # Sbjct: 13 ARRAGFTLVEMMVVIVILGLLATVVAINVLPNQEKAMKGKARADVSVLEQAL 64 # # # >aq_1433 # Length = 119 # # Score = 32.7 bits (73), Expect = 0.42 # Identities = 17/45 (37%), Positives = 30/45 (65%), Gaps = 1/45 (2%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRF-INISKDAKANTMLS 44 # M K GFTL+E+++A++I+ V+A +A P + I ++A +LS # Sbjct: 1 MPKEGGFTLVEVLVALMIVLVLAGLAIPLYEITFKRNAMRAVVLS 45 # # # >SMc00085 # Length = 242 # # Score = 32.7 bits (73), Expect = 0.45 # Identities = 19/64 (29%), Positives = 31/64 (47%), Gaps = 2/64 (3%) # # Query: 70 GEITINGVKTPLLNGYPSVNGKDSFEEINAQVQAWFNIDSVGKNVIEIDSSAAPFFIDKA 129 # G +TING+ P L+G PS D+ + + W ++D++ + FFID # Sbjct: 136 GSVTINGLARPKLSGKPSSLVPDN--DAAKNIFYWKDLDTMADSAGLASDRVVSFFIDAD 193 # # Query: 130 SSRN 133 # +S N # Sbjct: 194 ASDN 197 # # # >RSc3109 # Length = 240 # # Score = 32.0 bits (71), Expect = 0.60 # Identities = 12/22 (54%), Positives = 20/22 (90%) # # Query: 5 QGFTLIELIIAIVILGVIAVIA 26 # +GFTL+EL++AI +L ++AV+A # Sbjct: 10 RGFTLLELLVAITLLAILAVLA 31 # # # >BH2827 # Length = 102 # # Score = 32.0 bits (71), Expect = 0.77 # Identities = 15/54 (27%), Positives = 30/54 (54%), Gaps = 7/54 (12%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQ 59 # GFTL+E++I ++I+ ++ ++A P N ++ G E+ + LL +Q # Sbjct: 10 GFTLVEMMIVLMIISILLLVALPSMTK-------NNEVAGDKGCEATVKLLQTQ 56 # # # >RSp0470 # Length = 128 # # Score = 31.6 bits (70), Expect = 0.84 # Identities = 12/38 (31%), Positives = 23/38 (59%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTM 42 # +GFTLIEL++ + ++ ++ IA P++ AK + # Sbjct: 10 RGFTLIELMVVMAVIALLTTIALPQYFKHVDTAKERVL 47 # # # >slr2016 # Length = 158 # # Score = 31.6 bits (70), Expect = 0.85 # Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%) # # Query: 6 GFTLIELIIAIVILGVIAVIAAPRFINIS-KDAKANTMLSVAAGMESALTLLHSQALIE 63 # GFTL E ++++++L + P F+N ++AK + + S + L SQ++ E # Sbjct: 18 GFTLTENLVSLIVLSITLTAMLPAFMNFGLQNAKNRQLTGATSVANSVMNDLRSQSMTE 76 # # # >RSc2302 # Length = 172 # # Score = 31.6 bits (70), Expect = 0.90 # Identities = 11/26 (42%), Positives = 19/26 (72%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAP 28 # + GFTLIEL+I + ++G++A+ P # Sbjct: 17 RGHGFTLIELVITLALVGIVAMAIVP 42 # # # >RSc2679 # Length = 157 # # Score = 31.6 bits (70), Expect = 0.92 # Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61 # +G TL EL++ + +L ++ VIA P F + +A + + + +A+TL S+A+ # Sbjct: 11 RGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRAR---NASLDLSAAITLARSEAV 64 # # # >BH2825 # Length = 108 # # Score = 30.8 bits (68), Expect = 1.6 # Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFI---NISKDAK 38 # M+ +G+TLIE+++A+V L ++ P F+ N S D K # Sbjct: 1 MNDCKGYTLIEVLVALVCLSIMTAALFPAFVWFMNESADVK 41 # # # >MK1129 # Length = 265 # # Score = 30.4 bits (67), Expect = 1.8 # Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%) # # Query: 24 VIAAPRFINISKD-AKA-NTMLSVAAGMESALTLLHS---QALIEGQDIGKGEITINGVK 78 # V+ PRFI K+ A+A ++ + AG A+TL+ +A +EG +G G++T+ + # Sbjct: 81 VVHHPRFIEGLKEFARAGGKIVGICAG---AITLVKGGLVRAKVEGAGLGVGKVTLELER 137 # # Query: 79 TPLLNGYP 86 # PL G P # Sbjct: 138 DPLTEGLP 145 # # # >TM1271 # Length = 157 # # Score = 30.4 bits (67), Expect = 1.8 # Identities = 18/73 (24%), Positives = 31/73 (41%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M K GFTLIEL+I + I+ + + P + A+A + +E + # Sbjct: 1 MRKRAGFTLIELLIVMAIIAALMAVLIPTATGAMRKARATRIAVQLRNLEQGIEQYLMAT 60 # # Query: 61 LIEGQDIGKGEIT 73 # L +D+ +T # Sbjct: 61 LPATEDVDGKTLT 73 # # # >DR1233 # Length = 186 # # Score = 30.0 bits (66), Expect = 2.3 # Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%) # # Query: 5 QGFTLIELIIAIVILGVI-AVIAAPRFINISKDAKANTMLSVAAGMESAL 53 # QGFT+IE+++AI +LG++ AV+ A ++S + ++ L ++ L # Sbjct: 14 QGFTIIEILVAIALLGILTAVLTATLTGSLSLNRQSQKQLDTTTQVQGVL 63 # # # >SA0846 # Length = 356 # # Score = 30.0 bits (66), Expect = 2.3 # Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 7/44 (15%) # # Query: 78 KTPLLNGYP-------SVNGKDSFEEINAQVQAWFNIDSVGKNV 114 # K P+L+ P +GKD+++ NA+ WF D +G+++ # Sbjct: 103 KIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDL 146 # # # >RSc0717 # Length = 143 # # Score = 30.0 bits (66), Expect = 2.5 # Identities = 13/27 (48%), Positives = 19/27 (70%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAA 27 # M + GFT IEL+I + I GV+A+ A+ # Sbjct: 1 MLRPTGFTFIELLITLAIAGVLALAAS 27 # # # >PA3100 # Length = 172 # # Score = 30.0 bits (66), Expect = 2.6 # Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 3/68 (4%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # M ++GFTLIEL++ +VI+ V+ +A ++ + + + S A + + +L +A # Sbjct: 1 MRASRGFTLIELMVVMVIISVLIGLAV---LSTGFASTSRELDSEAERLAGLIGVLTDEA 57 # # Query: 61 LIEGQDIG 68 # +++ ++ G # Sbjct: 58 VLDNREYG 65 # # # >PA3098 # Length = 237 # # Score = 30.0 bits (66), Expect = 2.8 # Identities = 14/39 (35%), Positives = 24/39 (60%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKA 39 # M +GFTL+EL+IAI I ++A+ F ++ + +A # Sbjct: 1 MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQA 39 # # # >VC0412 # Length = 256 # # Score = 29.6 bits (65), Expect = 3.1 # Identities = 10/21 (47%), Positives = 19/21 (89%) # # Query: 4 NQGFTLIELIIAIVILGVIAV 24 # ++GFTLIE++I I++LG++ + # Sbjct: 2 SRGFTLIEMVITIILLGIVGL 22 # # # >SPBC25B2.04c # Length = 328 # # Score = 29.6 bits (65), Expect = 3.7 # Identities = 17/59 (28%), Positives = 27/59 (44%), Gaps = 13/59 (22%) # # Query: 101 VQAWFNIDSVGKNVIEIDS--SAAPFF-----------IDKASSRNQIYIFFSDAPTTG 146 # V+ WF S + I S AP+F +D+AS+ ++Y++F P TG # Sbjct: 99 VECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVGMPNTG 157 # # # >PA0677 # Length = 213 # # Score = 29.6 bits (65), Expect = 3.7 # Identities = 9/24 (37%), Positives = 21/24 (87%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIA 26 # + GFTLIE+++AI+++ +++++A # Sbjct: 13 RQAGFTLIEVMVAIMLMAIVSLMA 36 # # # >all1765 # Length = 185 # # Score = 28.9 bits (63), Expect = 5.2 # Identities = 11/36 (30%), Positives = 23/36 (63%) # # Query: 5 QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKAN 40 # +GFTL E++ I+++G++A +A P ++ + N # Sbjct: 19 RGFTLPEILAVILMVGILAALALPYWLTFVDTQRLN 54 # # # >PA0678 # Length = 149 # # Score = 28.9 bits (63), Expect = 5.6 # Identities = 20/66 (30%), Positives = 33/66 (49%), Gaps = 6/66 (9%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSV-AAGMESALTLLHSQAL 61 # + GFTLIEL++ +VI+G+ A I++S +L AA + L + +A # Sbjct: 5 RQSGFTLIELMVVLVIVGI-----ATAAISLSARPDPTGLLRQDAARLARLLEIAQGEAR 59 # # Query: 62 IEGQDI 67 # + G I # Sbjct: 60 VRGTPI 65 # # # >CAC0561 # Length = 878 # # Score = 28.9 bits (63), Expect = 5.9 # Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 12/90 (13%) # # Query: 19 LGVIAVIAAPRFINISK----DAKANTMLSVAAGMESALTLLHSQALIEGQDIGKGEITI 74 # LG I + P N+SK AK+N + A ++ + +L E Q + T # Sbjct: 599 LGTITLATVPN--NLSKTDVDTAKSNIEKAADAFIDHQSKEGYGTSLAESQ----VDTTY 652 # # Query: 75 NGVKTPLLNGYPSVNGKDSFEEINAQVQAW 104 # +GVK P++NGYP G +SF A V + # Sbjct: 653 HGVKGPIVNGYPW--GSNSFVANEAIVMGY 680 # # # >SPy0103 # Length = 108 # # Score = 28.9 bits (63), Expect = 5.9 # Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 7/58 (12%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60 # K +GFTL+E+++ I+++ V+ ++ P N+SK T G + + L+ +QA # Sbjct: 12 KLKGFTLLEMLLVILVISVLMLLFVP---NLSKQKDRVT----ETGNAAVVKLVENQA 62 # # # >gspJ # Length = 195 # # Score = 28.5 bits (62), Expect = 6.6 # Identities = 10/26 (38%), Positives = 21/26 (80%) # # Query: 1 MSKNQGFTLIELIIAIVILGVIAVIA 26 # +++ QGFTL+E++ A+ I +++V+A # Sbjct: 2 INRQQGFTLLEVMAALAIFSMLSVLA 27 # # # >sll1508 # Length = 276 # # Score = 28.5 bits (62), Expect = 6.9 # Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%) # # Query: 42 MLSVAAGMESAL--TLLHSQALIEGQDIGKGEITINGVKTPLLNG 84 # MLS G A T+ H A + DIG I +NG + PLL+G # Sbjct: 59 MLSTELGEPGATIRTVEHLLATLVALDIGDLRIEVNGPEVPLLDG 103 # # # >ppdB # Length = 187 # # Score = 28.5 bits (62), Expect = 6.9 # Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFI 31 # K QGF+L+E++IA+ I V+ ++ A RF+ # Sbjct: 4 KEQGFSLLEVLIAMAISSVL-LLGAARFL 31 # # # >XF0539 # Length = 187 # # Score = 28.5 bits (62), Expect = 7.4 # Identities = 9/28 (32%), Positives = 19/28 (67%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRF 30 # + QGFTL+E+++ +++ V+ I P + # Sbjct: 4 RQQGFTLLEVMVTLIVPAVLGAITLPLY 31 # # # >ECs3682 # Length = 187 # # Score = 28.5 bits (62), Expect = 7.5 # Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFI 31 # K QGF+L+E++IA+ I V+ ++ A RF+ # Sbjct: 4 KEQGFSLLEVLIAMAISSVL-LLGAARFL 31 # # # >ZppdB # Length = 187 # # Score = 28.5 bits (62), Expect = 7.5 # Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%) # # Query: 3 KNQGFTLIELIIAIVILGVIAVIAAPRFI 31 # K QGF+L+E++IA+ I V+ ++ A RF+ # Sbjct: 4 KEQGFSLLEVLIAMAISSVL-LLGAARFL 31 # # # >ECs3333 # Length = 118 # # Score = 28.1 bits (61), Expect = 8.8 # Identities = 18/77 (23%), Positives = 41/77 (52%), Gaps = 4/77 (5%) # # Query: 48 GMESALTLLHSQALIEGQDIGK--GEITINGVKTPLLNGYPSVNGKDSFEEINAQVQAWF 105 # G+++ T+ ++ +E +I + ++G+ + LLNG+ + G ++ +N + W # Sbjct: 6 GIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEAL--LNTRGTTWR 63 # # Query: 106 NIDSVGKNVIEIDSSAA 122 # +D +N+I +SAA # Sbjct: 64 KLDETTRNIITDAASAA 80 # # Database: myva Posted date: Sep 16, 2002 2:25 PM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.317 0.135 0.377 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,247,951 Number of Sequences: 192987 Number of extensions: 750696 Number of successful extensions: 2248 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 2133 Number of HSP's gapped (non-prelim): 132 length of query: 174 length of database: 59,019,183 effective HSP length: 102 effective length of query: 72 effective length of database: 39,334,509 effective search space: 2832084648 effective search space used: 2832084648 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits) S2: 61 (28.1 bits)
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