Spring 2012
ECE 564 Modern Light Microscopy
Text: “Introduction to Optical Microscopy” by J. Mertz (Roberts and Company, 2010)
Schedule: 11:00-12:20 T-R, 245 Everitt Lab;
Teaching Assistant:
Office Hours:
Description: Description: Description: Description: Description: Description: Description: Description: subplot_small.gif
#
Day
Date
Topic
Supporting Material
Homework
Links
References
28
T
Jan 17
Introduction
Microscopy Milestones (Nature)
1D Fourier Transforms (ECE 460)
27
R
Jan 19
Groundwork: 2D, 3D Fourier transforms
Papoulis [ 1], Bracewell [ 2], Goodman [ 3]
26
T
Jan 24
Groundwork: 2D, 3D Fourier transforms
25
R
Jan 26
Propagation of Gaussian beams
Yariv- Optical waves in crystals
24
T
Jan 31
Propagation of Gaussian beams
23
R
Feb 02
Propagation of Gaussian beams
Born & Wolf [ 4], Jackson [ 5]
22
T
Feb 07
Propagation in dispersive media
21
R
Feb 9
Propagation in inhomogeneous media
Born & Wolf [ 4], van de Hulst [ 6], Ishimaru [ 7]
20
T
Feb 14
Propagation in inhomogeneous media
19
R
Feb 16
Propagation in inhomogeneous media
Berne & Pecora [ 8]
18
T
Feb 21
Dynamic light scattering
17
R
Feb 23
Dynamic light scattering
Blombergen [ 9], Boyd [ 10], Shen [ 11]
16
T
Feb 28
Propagation in nonlinear media
No lecture (APS Meeting)- to be rescheduled;
15
R
Mar 01
Spatial and temporal coherence
Make-up Lectures, Friday, March 9th, 1-3PM
No lecture (APS Meeting)- to be rescheduled Coherence
Wolf, Mandel & Wolf [ 12, 13], Glauber [ 14], Goodman- Statistical optics [ 15]
14
T
Mar 06
Spatial and temporal coherence
Webb- Biomed. Imaging
13
R
Mar 08
Image characteristics
Pluta [ 16]
12
T
Mar 13
Review
R
Mar 15
Midterm
T
Mar 20
Spring Break
R
Mar 22
Spring Break
11
T
Mar 27
Intrinsic contrast microscopy: dark field, Schlerein, phase contrast, DIC, etc
Ch. 14
10
R
Mar 29
Intrinsic contrast microscopy: dark field, Schlerein, phase contrast, DIC, etc
Ch. 11
9
T
Apr 03
Confocal microscopy (April 24)
Ch. 12
8
R
Apr 05
Quantitative phase microscopy
Ch. 13
7
T
Apr 10
Optical coherence tomography
HW5
6
R
Apr 12
Optical coherence tomography
5
T
Apr 17
· Nonlinear structured illumination: Renjie Zhou
Ch. 15
4
R
Apr 19
· Two photon fluorescence microscopy (TPFM): Adeel Ahmad
· Fluorescence Lifetime Imaging Microscopy (FLIM): Fred South
Ch. 16
3
T
Apr 24
· Confocal Microscopy; STORM
Ch. 18
2
R
Apr 26
· Coherent anti-Stokes Raman scattering (CARS) microscopy: Nathan Shemonski
· Fluorescence recovery after photobleaching (FRAP): Umer Hassan
Ch. 18
1
T
Friday, Apr 27
10-1
· Fluorescence correlation spectroscopy (FCS): Brent DeVetter
· Photoaccoustic microscopy: Jungmi Hong
· Near-field scanning optical microscopy (NSOM): Matthew Kole
· Total internal reflection fluorescence (TIRF) microscopy: Mathew Johnson
· Stimulated emission depletion (STED): Chris Edwards
R
May 3
Reading Day
R
May 5
Reports due by email
Grading formula: Midterm 30%; Final report - 20%; Homework - 30%; Presentation 20%; Class participation - 5% .
REFERENCES
[1] A. Papoulis, The Fourier integral and its applications. New York,: McGraw-Hill, 1962.
[2] R. N. Bracewell, The Fourier transform and its applications, 3rd ed. Boston: McGraw Hill, 2000.
[3] J. W. Goodman, Introduction to Fourier optics, 2nd ed. New York: McGraw-Hill, 1996.
[5] J. D. Jackson, Classical electrodynamics, 3rd ed. New York: Wiley, 1999.
[6] H. C. van de Hulst, Light Scattering by Small Particles New York: Dover Publications 1981.
[10] R. W. Boyd, Nonlinear optics, 3rd ed. Amsterdam ; Boston: Academic Press, 2008.
[11] Y. R. Shen, The principles of nonlinear optics. New York: J. Wiley, 1984.
[15] J. W. Goodman, Statistical optics. New York: Wiley, 1985.
[16] M. Pluta, Advanced light microscopy. Warszawa: Polish Scientific Publishers, 1988.
Open the original version of this page.
Usablenet Assistive is a UsableNet product. Usablenet Assistive Main Page.